Considerations for digital PCR as an accurate molecular diagnostic tool

JF Huggett, S Cowen, CA Foy - Clinical chemistry, 2015 - academic.oup.com
Abstract BACKGROUND Digital PCR (dPCR) is an increasingly popular manifestation of
PCR that offers a number of unique advantages when applied to preclinical research …

Circulating miRNA analysis for cancer diagnostics and therapy

L Valihrach, P Androvic, M Kubista - Molecular Aspects of Medicine, 2020 - Elsevier
Successful treatment of cancer depends on early diagnosis and effective monitoring of
patients' response to therapy. Traditional tools based on tumor biopsies lack the sensitivity …

Choice of capture and extraction methods affect detection of freshwater biodiversity from environmental DNA

K Deiner, JC Walser, E Mächler, F Altermatt - Biological conservation, 2015 - Elsevier
Environmental DNA (eDNA) is used to detect biodiversity by the capture, extraction, and
identification of DNA shed to the environment. However, eDNA capture and extraction …

The Digital MIQE Guidelines: Minimum Information for Publication of Quantitative Digital PCR Experiments

JF Huggett, CA Foy, V Benes, K Emslie… - Clinical …, 2013 - academic.oup.com
There is growing interest in digital PCR (dPCR) because technological progress makes it a
practical and increasingly affordable technology. dPCR allows the precise quantification of …

Analysis of circulating microRNA: preanalytical and analytical challenges

JS McDonald, D Milosevic, HV Reddi… - Clinical …, 2011 - academic.oup.com
BACKGROUND There is great interest in circulating microRNAs (miRNAs) as disease
biomarkers. Translating promising miRNAs into validated clinical tests requires the …

Recent advances in quantitative PCR (qPCR) applications in food microbiology

F Postollec, H Falentin, S Pavan, J Combrisson… - Food …, 2011 - Elsevier
Molecular methods are being increasingly applied to detect, quantify and study microbial
populations in food or during food processes. Among these methods, PCR-based …

Use and Misuse of Cq in qPCR Data Analysis and Reporting

A Ruiz-Villalba, JM Ruijter, MJB van den Hoff - Life, 2021 - mdpi.com
In the analysis of quantitative PCR (qPCR) data, the quantification cycle (Cq) indicates the
position of the amplification curve with respect to the cycle axis. Because Cq is directly …

Why the need for qPCR publication guidelines?—The case for MIQE

SA Bustin - Methods, 2010 - Elsevier
The polymerase chain reaction (PCR) has matured from a labour-and time-intensive, low
throughput qualitative gel-based technique to an easily automated, rapid, high throughput …

Evaluation of qPCR curve analysis methods for reliable biomarker discovery: bias, resolution, precision, and implications

JM Ruijter, MW Pfaffl, S Zhao, AN Spiess, G Boggy… - Methods, 2013 - Elsevier
RNA transcripts such as mRNA or microRNA are frequently used as biomarkers to
determine disease state or response to therapy. Reverse transcription (RT) in combination …

Taking qPCR to a higher level: Analysis of CNV reveals the power of high throughput qPCR to enhance quantitative resolution

S Weaver, S Dube, A Mir, J Qin, G Sun… - Methods, 2010 - Elsevier
This paper assesses the quantitative resolution of qPCR using copy number variation (CNV)
as a paradigm. An error model is developed for real-time qPCR data showing how the …