[HTML][HTML] Invited review: Recursive models in animal breeding: Interpretation, limitations, and extensions

L Varona, O González-Recio - Journal of Dairy Science, 2023 - Elsevier
Structural equation models allow causal effects between 2 or more variables to be
considered and can postulate unidirectional (recursive models; RM) or bidirectional …

[HTML][HTML] Inferring relationships between Phosphorus utilization, feed per gain, and bodyweight gain in an F2 cross of Japanese quail using recursive models

P Beck, HP Piepho, M Rodehutscord, J Bennewitz - Poultry Science, 2016 - Elsevier
Phosphorus utilization (PU) has received considerable attention in poultry nutrition.
However, reliable estimates of genetic parameters for PU and related traits have largely not …

A Bayesian model for the analysis of transgenerational epigenetic variation

L Varona, S Munilla, EF Mouresan… - G3: Genes …, 2015 - academic.oup.com
Epigenetics has become one of the major areas of biological research. However, the degree
of phenotypic variability that is explained by epigenetic processes still remains unclear …

Investigating causal biological relationships between reproductive performance traits in high-performing gilts and sows

K Chitakasempornkul, MB Meneget… - Journal of Animal …, 2019 - academic.oup.com
Efficient management of swine production systems requires understanding of complex
reproductive physiological mechanisms. Our objective in this study was to investigate …

Heritable environmental variance causes nonlinear relationships between traits: application to birth weight and stillbirth of pigs

HA Mulder, WG Hill, EF Knol - Genetics, 2015 - academic.oup.com
There is recent evidence from laboratory experiments and analysis of livestock populations
that not only the phenotype itself, but also its environmental variance, is under genetic …

A diallel of the mouse Collaborative Cross founders reveals strong strain-specific maternal effects on litter size

JR Shorter, PL Maurizio, TA Bell… - G3: Genes …, 2019 - academic.oup.com
Reproductive success in the eight founder strains of the Collaborative Cross (CC) was
measured using a diallel-mating scheme. Over a 48-month period we generated 4,448 …

A cross-specific multiplicative binomial recursive model for the analysis of perinatal mortality in a diallel cross among three varieties of Iberian pig

L Varona, JL Noguera, J Casellas, MM de Hijas… - Scientific reports, 2020 - nature.com
Perinatal piglet mortality is an important factor in pig production from economic and animal
welfare perspectives; however, the statistical analysis of mortality is difficult because of its …

Accounting for data architecture on structural equation modeling of feedlot cattle performance

K Chitakasempornkul, MW Sanderson, E Cha… - Journal of Agricultural …, 2018 - Springer
Structural equation models (SEM) are a type of multi-trait model increasingly being used for
inferring functional relationships between multiple outcomes using operational data from …

Alternative count Bayesian models for genetic evaluation of litter traits in pigs

HT Silva, DBD Marques, PS Lopes, JT De Paiva… - Livestock Science, 2019 - Elsevier
Abstract We compared Hurdle Poisson (Hupoisson), Zero Inflated Poisson (Zipoisson),
Poisson and Gaussian Bayesian mixed models for genetic evaluation of litter traits in pigs …

Multi-breed genetic parameters and genome-wide association studies for mortality rate at birth in pigs

M An, G Zhou, Y Li, T Xiang, Y Ma, X Liu, X Li, S Zhao… - 2021 - researchsquare.com
Background Piglet mortality is an economically important complex trait that impacts sow
prolificacy in the pig industry. The genetic parameters estimations and genome-wide …