[HTML][HTML] Achievements and challenges of genomics-assisted breeding in forest trees: From marker-assisted selection to genome editing
S Ahmar, P Ballesta, M Ali, F Mora-Poblete - International Journal of …, 2021 - mdpi.com
Forest tree breeding efforts have focused mainly on improving traits of economic importance,
selecting trees suited to new environments or generating trees that are more resilient to …
selecting trees suited to new environments or generating trees that are more resilient to …
[HTML][HTML] Impact of marker ascertainment bias on genomic selection accuracy and estimates of genetic diversity
Genome-wide molecular markers are often being used to evaluate genetic diversity in
germplasm collections and for making genomic selections in breeding programs. To …
germplasm collections and for making genomic selections in breeding programs. To …
[HTML][HTML] Evaluating the accuracy of genomic prediction of growth and wood traits in two Eucalyptus species and their F1 hybrids
B Tan, D Grattapaglia, GS Martins, KZ Ferreira… - BMC plant biology, 2017 - Springer
Background Genomic prediction is a genomics assisted breeding methodology that can
increase genetic gains by accelerating the breeding cycle and potentially improving the …
increase genetic gains by accelerating the breeding cycle and potentially improving the …
[HTML][HTML] Deep learning-empowered crop breeding: intelligent, efficient and promising
Crop breeding is one of the main approaches to increase crop yield and improve crop
quality. However, the breeding process faces challenges such as complex data, difficulties …
quality. However, the breeding process faces challenges such as complex data, difficulties …
[HTML][HTML] Design of training populations for selective phenotyping in genomic prediction
D Akdemir, J Isidro-Sánchez - Scientific reports, 2019 - nature.com
Phenotyping is the current bottleneck in plant breeding, especially because next-generation
sequencing has decreased genotyping cost more than 100.000 fold in the last 20 years …
sequencing has decreased genotyping cost more than 100.000 fold in the last 20 years …
[HTML][HTML] Maximizing efficiency of genomic selection in CIMMYT's tropical maize breeding program
Key message Historical data from breeding programs can be efficiently used to improve
genomic selection accuracy, especially when the training set is optimized to subset …
genomic selection accuracy, especially when the training set is optimized to subset …
Prospects for genomic selection in cassava breeding
MD Wolfe, DP Del Carpio, O Alabi… - The Plant …, 2017 - Wiley Online Library
Cassava (Manihot esculenta Crantz) is a clonally propagated staple food crop in the tropics.
Genomic selection (GS) has been implemented at three breeding institutions in Africa to …
Genomic selection (GS) has been implemented at three breeding institutions in Africa to …
Does genomic selection have a future in plant breeding?
E Jonas, DJ De Koning - Trends in biotechnology, 2013 - cell.com
Plant breeding largely depends on phenotypic selection in plots and only for some, often
disease-resistance-related traits, uses genetic markers. The more recently developed …
disease-resistance-related traits, uses genetic markers. The more recently developed …
Assessing genomic selection prediction accuracy in a dynamic barley breeding population
Prediction accuracy of genomic selection (GS) has been previously evaluated through
simulation and cross‐validation; however, validation based on progeny performance in a …
simulation and cross‐validation; however, validation based on progeny performance in a …
Deep kernel for genomic and near infrared predictions in multi-environment breeding trials
J Cuevas, O Montesinos-López… - G3: Genes …, 2019 - academic.oup.com
Kernel methods are flexible and easy to interpret and have been successfully used in
genomic-enabled prediction of various plant species. Kernel methods used in genomic …
genomic-enabled prediction of various plant species. Kernel methods used in genomic …