[HTML][HTML] Genome structure variation analyses of peach reveal population dynamics and a 1.67 Mb causal inversion for fruit shape

J Guan, Y Xu, Y Yu, J Fu, F Ren, J Guo, J Zhao, Q Jiang… - Genome Biology, 2021 - Springer
Abstract Background Structural variations (SVs), a major resource of genomic variation, can
have profound consequences on phenotypic variation, yet the impacts of SVs remain largely …

[HTML][HTML] An integrated peach genome structural variation map uncovers genes associated with fruit traits

J Guo, K Cao, C Deng, Y Li, G Zhu, W Fang, C Chen… - Genome biology, 2020 - Springer
Abstract Background Genome structural variations (SVs) have been associated with key
traits in a wide range of agronomically important species; however, SV profiles of peach and …

[HTML][HTML] Population-scale peach genome analyses unravel selection patterns and biochemical basis underlying fruit flavor

Y Yu, J Guan, Y Xu, F Ren, Z Zhang, J Yan, J Fu… - Nature …, 2021 - nature.com
A narrow genetic basis in modern cultivars and strong linkage disequilibrium in peach
(Prunus persica) has restricted resolution power for association studies in this model fruit …

Chromosome-level genome assemblies of five Prunus species and genome-wide association studies for key agronomic traits in peach

Q Tan, S Li, Y Zhang, M Chen, B Wen… - Horticulture …, 2021 - academic.oup.com
Prunus species include many important perennial fruit crops, such as peach, plum, apricot,
and related wild species. Here, we report de novo genome assemblies for five species …

[HTML][HTML] Genomic analyses of an extensive collection of wild and cultivated accessions provide new insights into peach breeding history

Y Li, KE Cao, G Zhu, W Fang, C Chen, X Wang, P Zhao… - Genome biology, 2019 - Springer
Background Human selection has a long history of transforming crop genomes. Peach
(Prunus persica) has undergone more than 5000 years of domestication that led to …

[HTML][HTML] Genome-wide association study of 12 agronomic traits in peach

KE Cao, Z Zhou, QI Wang, J Guo, P Zhao, G Zhu… - Nature …, 2016 - nature.com
Peach (Prunus persica L.) is a highly valuable crop species and is recognized by molecular
researchers as a model fruit for the Rosaceae family. Using whole-genome sequencing data …

A 1.7Mb chromosomal inversion downstream of a PpOFP1 gene is responsible for flat fruit shape in peach

H Zhou, R Ma, L Gao, J Zhang, A Zhang… - Plant biotechnology …, 2021 - Wiley Online Library
Flat peaches have become popular worldwide due to their novelty and convenience. The
peach flat fruit trait is genetically controlled by a single gene at the S locus, but its genetic …

[HTML][HTML] Genome re-sequencing reveals the evolutionary history of peach fruit edibility

Y Yu, J Fu, Y Xu, J Zhang, F Ren, H Zhao, S Tian… - Nature …, 2018 - nature.com
Peach (Prunus persica) is an economically important fruit crop and a well-characterized
model for studying Prunus species. Here we explore the evolutionary history of peach using …

[HTML][HTML] Multi-locus genome-wide association studies reveal fruit quality hotspots in peach genome

C da Silva Linge, L Cai, W Fu, J Clark… - Frontiers in plant …, 2021 - frontiersin.org
Peach is one of the most important fruit crops in the world, with the global annual production
about 24.6 million tons. The United States is the fourth-largest producer after China, Spain …

[HTML][HTML] Pan-genome analysis of 13 Malus accessions reveals structural and sequence variations associated with fruit traits

T Wang, S Duan, C Xu, Y Wang, X Zhang, X Xu… - Nature …, 2023 - nature.com
Structural variations (SVs) and copy number variations (CNVs) contribute to trait variations in
fleshy-fruited species. Here, we assemble 10 genomes of genetically diverse Malus …