Abstract The Reference Sequence (RefSeq) project at the National Center for Biotechnology
Information (NCBI) contains nearly 200 000 bacterial and archaeal genomes and 150 …

Abstract The Reference Sequence (RefSeq) project at the National Center for Biotechnology
Information (NCBI) provides annotation for over 95 000 prokaryotic genomes that meet …

Abstract The Reference Sequence (RefSeq) project at the National Center for Biotechnology
Information (NCBI) contains over 315 000 bacterial and archaeal genomes and 236 million …

NCBI RefSeq genome collection http://www. ncbi. nlm. nih. gov/genome represents all three
major domains of life: Eukarya, Bacteria and Archaea as well as Viruses. Prokaryotic …

Accurate annotation of all protein-coding sequences (CDSs) is an essential prerequisite to
fully exploit the rapidly growing repertoire of completely sequenced prokaryotic genomes …

Recent technological advances have opened unprecedented opportunities for large-scale
sequencing and analysis of populations of pathogenic species in disease outbreaks, as well …

Abstract Motivation The biases in CoDing Sequence (CDS) prediction tools, which have
been based on historic genomic annotations from model organisms, impact our …

We developed a prokaryotic genome annotation pipeline, DFAST, that also supports
genome submission to public sequence databases. DFAST was originally started as an on …

Motivation: Prokaryotic genomes are sequenced and annotated at an increasing rate. The
methods of annotation vary between sequencing groups. It makes genome comparison …

The RefSeq project at the National Center for Biotechnology Information (NCBI) maintains
and curates a publicly available database of annotated genomic, transcript, and protein …