[HTML][HTML] Molecular subsets in the gene expression signatures of scleroderma skin

A Milano, SA Pendergrass, JL Sargent, LK George… - PloS one, 2008 - journals.plos.org
Background Scleroderma is a clinically heterogeneous disease with a complex phenotype.
The disease is characterized by vascular dysfunction, tissue fibrosis, internal organ …

Dissecting the heterogeneity of skin gene expression patterns in systemic sclerosis

S Assassi, WR Swindell, M Wu, FD Tan… - Arthritis & …, 2015 - Wiley Online Library
Objective To examine the heterogeneity of global transcriptome patterns in systemic
sclerosis (SSc) skin in a large sample of patients with SSc and control subjects. Methods …

Gene profiling of scleroderma skin reveals robust signatures of disease that are imperfectly reflected in the transcript profiles of explanted fibroblasts

H Gardner, JR Shearstone, R Bandaru… - Arthritis & …, 2006 - Wiley Online Library
Objective To determine whether biopsy specimens obtained from systemic sclerosis (SSc)
lesions show a distinctive gene profile, whether that gene profile is maintained in fibroblasts …

Systemic and cell type-specific gene expression patterns in scleroderma skin

ML Whitfield, DR Finlay, JI Murray… - Proceedings of the …, 2003 - National Acad Sciences
We used DNA microarrays representing> 12,000 human genes to characterize gene
expression patterns in skin biopsies from individuals with a diagnosis of systemic sclerosis …

[HTML][HTML] A TGFβ-responsive gene signature is associated with a subset of diffuse scleroderma with increased disease severity

JL Sargent, A Milano, S Bhattacharyya, J Varga… - Journal of Investigative …, 2010 - Elsevier
Systemic sclerosis is a complex disease with widespread skin fibrosis and variable visceral
organ involvement. Since transforming growth factor-β (TGFβ) has been implicated in driving …

[HTML][HTML] Experimentally-derived fibroblast gene signatures identify molecular pathways associated with distinct subsets of systemic sclerosis patients in three …

ME Johnson, JM Mahoney, J Taroni, JL Sargent… - PloS one, 2015 - journals.plos.org
Genome-wide expression profiling in systemic sclerosis (SSc) has identified four
'intrinsic'subsets of disease (fibroproliferative, inflammatory, limited, and normal-like), each …

[HTML][HTML] Cutaneous gene expression by DNA microarray in murine sclerodermatous graft-versus-host disease, a model for human scleroderma

L Zhou, D Askew, C Wu, AC Gilliam - Journal of Investigative Dermatology, 2007 - Elsevier
The molecular mechanisms governing skin fibrosis in murine sclerodermatous graft-versus-
host disease (Scl GVHD) are not known. We used Affymetrix DNA microarrays representing> …

[HTML][HTML] Systems level analysis of systemic sclerosis shows a network of immune and profibrotic pathways connected with genetic polymorphisms

JM Mahoney, J Taroni, V Martyanov… - PLoS computational …, 2015 - journals.plos.org
Systemic sclerosis (SSc) is a rare systemic autoimmune disease characterized by skin and
organ fibrosis. The pathogenesis of SSc and its progression are poorly understood. The SSc …

A machine learning classifier for assigning individual patients with systemic sclerosis to intrinsic molecular subsets

JM Franks, V Martyanov, G Cai, Y Wang… - Arthritis & …, 2019 - Wiley Online Library
Objective High‐throughput gene expression profiling of tissue samples from patients with
systemic sclerosis (SS c) has identified 4 “intrinsic” gene expression subsets: inflammatory …

[HTML][HTML] Intrinsic gene expression subsets of diffuse cutaneous systemic sclerosis are stable in serial skin biopsies

SA Pendergrass, R Lemaire, IP Francis… - Journal of Investigative …, 2012 - Elsevier
Skin biopsy gene expression was analyzed by DNA microarray from 13 diffuse cutaneous
systemic sclerosis (dSSc) patients enrolled in an open-label study of rituximab, 9 dSSc …