A DNA-based registry for all animal species: the Barcode Index Number (BIN) system

S Ratnasingham, PDN Hebert - PloS one, 2013 - journals.plos.org
Because many animal species are undescribed, and because the identification of known
species is often difficult, interim taxonomic nomenclature has often been used in biodiversity …

Identification of birds through DNA barcodes

PDN Hebert, MY Stoeckle, TS Zemlak, CM Francis - PLoS biology, 2004 - journals.plos.org
Short DNA sequences from a standardized region of the genome provide a DNA barcode for
identifying species. Compiling a public library of DNA barcodes linked to named specimens …

BAGS: An automated Barcode, Audit & Grade System for DNA barcode reference libraries

JT Fontes, PE Vieira, T Ekrem, P Soares, FO Costa - 2021 - Wiley Online Library
Biodiversity studies greatly benefit from molecular tools, such as DNA metabarcoding, which
provides an effective identification tool in biomonitoring and conservation programmes. The …

Molecular evolution of a widely-adopted taxonomic marker (COI) across the animal tree of life

M Pentinsaari, H Salmela, M Mutanen, T Roslin - Scientific reports, 2016 - nature.com
DNA barcodes are widely used for identification and discovery of species. While such use
draws on information at the DNA level, the current amassment of ca. 4.7 million COI …

Beyond DNA barcoding: The unrealized potential of genome skim data in sample identification

K Bohmann, S Mirarab, V Bafna, MTP Gilbert - 2020 - Wiley Online Library
Genetic tools are increasingly used to identify and discriminate between species. One key
transition in this process was the recognition of the potential of the ca 658bp fragment of the …

A reference library for Canadian invertebrates with 1.5 million barcodes, voucher specimens, and DNA samples

JR DeWaard, S Ratnasingham, EV Zakharov… - Scientific data, 2019 - nature.com
The reliable taxonomic identification of organisms through DNA sequence data requires a
well parameterized library of curated reference sequences. However, it is estimated that just …

DNA barcode divergence among species and genera of birds and fishes

RD Ward - Molecular ecology resources, 2009 - Wiley Online Library
COI DNA barcoding is increasingly recognized as a significant new tool for the recognition
and identification of animal species. Here, publicly available barcode data are compiled and …

Barcoding in the dark?: A critical view of the sufficiency of zoological DNA barcoding databases and a plea for broader integration of taxonomic knowledge

S Kvist - Molecular phylogenetics and evolution, 2013 - Elsevier
The functionality of standard zoological DNA barcoding practice (the identification of
unknown specimens by comparison of COI sequences) is contingent on working barcode …

Statistical approaches for DNA barcoding

R Nielsen, M Matz - Systematic biology, 2006 - academic.oup.com
The use of DNA as a tool for species identification has become known as" DNA
barcoding"(Floyd et al., 2002; Hebert et al., 2003; Remigio and Hebert, 2003). The basic …

A universal DNA mini-barcode for biodiversity analysis

I Meusnier, GAC Singer, JF Landry, DA Hickey… - BMC genomics, 2008 - Springer
Background The goal of DNA barcoding is to develop a species-specific sequence library for
all eukaryotes. A 650 bp fragment of the cytochrome c oxidase 1 (CO1) gene has been used …