Codon usage bias and genetic diversity in chloroplast genomes of Elaeagnus species (Myrtiflorae: Elaeagnaceae)
C Li, L Zhou, J Nie, S Wu, W Li, Y Liu, Y Liu - Physiology and Molecular …, 2023 - Springer
Codon usage bias (CUB) reveals the characteristics of species and can be utilized to
understand their evolutionary relationship, increase the target genes' expression in the …
understand their evolutionary relationship, increase the target genes' expression in the …
[HTML][HTML] Comparative analysis of codon bias in the chloroplast genomes of theaceae species
Z Wang, Q Cai, Y Wang, M Li, C Wang, Z Wang… - Frontiers in …, 2022 - frontiersin.org
Theaceae species are dicotyledonous angiosperms with extremely high ornamental and
economic value. The chloroplast genome is traditionally used to study species evolution …
economic value. The chloroplast genome is traditionally used to study species evolution …
Comparative analysis of codon usage patterns in chloroplast genomes of the Asteraceae family
X Nie, P Deng, K Feng, P Liu, X Du, FM You… - Plant molecular biology …, 2014 - Springer
Codon usage bias (CUB) is an important evolutionary feature in a genome and has been
widely documented from prokaryotes to eukaryotes. However, the significance of CUB in the …
widely documented from prokaryotes to eukaryotes. However, the significance of CUB in the …
Deciphering codon usage patterns and evolutionary forces in chloroplast genes of Camellia sinensis var. assamica and Camellia sinensis var. sinensis in comparison …
S Yengkhom, A Uddin, S Chakraborty - Journal of Integrative Agriculture, 2019 - Elsevier
Codon usage bias (CUB) is a unique property of genome which refers to non-random usage
of synonymous codons in coding sequences. The present study makes an attempt to find out …
of synonymous codons in coding sequences. The present study makes an attempt to find out …
Analysis of codon usage bias of chloroplast genes in Oryza species: Codon usage of chloroplast genes in Oryza species
S Chakraborty, S Yengkhom, A Uddin - Planta, 2020 - Springer
Main conclusion The codon usage bias in chloroplast genes of Oryza species was low and
AT rich. The pattern of codon usage was different among Oryza species and mainly …
AT rich. The pattern of codon usage was different among Oryza species and mainly …
[HTML][HTML] Comparative analysis of codon usage patterns in chloroplast genomes of six Euphorbiaceae species
Z Wang, B Xu, B Li, Q Zhou, G Wang, X Jiang, C Wang… - PeerJ, 2020 - peerj.com
Euphorbiaceae plants are important as suppliers of biodiesel. In the current study, the codon
usage patterns and sources of variance in chloroplast genome sequences of six different …
usage patterns and sources of variance in chloroplast genome sequences of six different …
[HTML][HTML] Molecular characterizations of genes in chloroplast genomes of the genus Arachis L. (Fabaceae) based on the codon usage divergence
S Yang, G Li, H Li - Plos one, 2023 - journals.plos.org
Studies on the molecular characteristics of chloroplast genome are generally important for
clarifying the evolutionary processes of plant species. The base composition, the effective …
clarifying the evolutionary processes of plant species. The base composition, the effective …
[HTML][HTML] Codon usage bias in chloroplast genes implicate adaptive evolution of four ginger species
Q Yang, C Xin, QS Xiao, YT Lin, L Li… - Frontiers in Plant …, 2023 - frontiersin.org
Codon usage bias (CUB) refers to different codons exhibiting varying frequencies of usage
in the genome. Studying CUB is crucial for understanding genome structure, function, and …
in the genome. Studying CUB is crucial for understanding genome structure, function, and …
[HTML][HTML] Comparative analysis of codon usage patterns in chloroplast genomes of five Miscanthus species and related species
J Sheng, X She, X Liu, J Wang, Z Hu - PeerJ, 2021 - peerj.com
Miscanthus is not only a perennial fiber biomass crop, but also valuable breeding resource
for its low-nutrient requirements, photosynthetic efficiency and strong adaptability to …
for its low-nutrient requirements, photosynthetic efficiency and strong adaptability to …
Analysis of codon usage patterns of the chloroplast genomes in the Poaceae family
Y Zhang, X Nie, X Jia, C Zhao, SS Biradar… - Australian Journal of …, 2012 - CSIRO Publishing
Codon usage patterns of 23 Poaceae chloroplast genomes were analysed in this study.
Neutrality analysis indicated that the codon usage patterns have significant correlations with …
Neutrality analysis indicated that the codon usage patterns have significant correlations with …
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