The emerging complexity of gene fusions in cancer
F Mertens, B Johansson, T Fioretos… - Nature Reviews Cancer, 2015 - nature.com
Structural chromosome rearrangements may result in the exchange of coding or regulatory
DNA sequences between genes. Many such gene fusions are strong driver mutations in …
DNA sequences between genes. Many such gene fusions are strong driver mutations in …
Fusion genes and their discovery using high throughput sequencing
Fusion genes are hybrid genes that combine parts of two or more original genes. They can
form as a result of chromosomal rearrangements or abnormal transcription, and have been …
form as a result of chromosomal rearrangements or abnormal transcription, and have been …
Discovering and understanding oncogenic gene fusions through data intensive computational approaches
NS Latysheva, MM Babu - Nucleic acids research, 2016 - academic.oup.com
Although gene fusions have been recognized as important drivers of cancer for decades,
our understanding of the prevalence and function of gene fusions has been revolutionized …
our understanding of the prevalence and function of gene fusions has been revolutionized …
[HTML][HTML] A multiplexed amplicon approach for detecting gene fusions by next-generation sequencing
C Beadling, AI Wald, A Warrick, TL Neff, S Zhong… - The Journal of molecular …, 2016 - Elsevier
Chromosomal rearrangements that result in oncogenic gene fusions are clinically important
drivers of many cancer types. Rapid and sensitive methods are therefore needed to detect a …
drivers of many cancer types. Rapid and sensitive methods are therefore needed to detect a …
TumorFusions: an integrative resource for cancer-associated transcript fusions
Gene fusion represents a class of molecular aberrations in cancer and has been exploited
for therapeutic purposes. In this paper we describe TumorFusions, a data portal that …
for therapeutic purposes. In this paper we describe TumorFusions, a data portal that …
[HTML][HTML] Breakpoint analysis of transcriptional and genomic profiles uncovers novel gene fusions spanning multiple human cancer types
CP Giacomini, S Sun, S Varma, AH Shain… - PLoS …, 2013 - journals.plos.org
Gene fusions, like BCR/ABL1 in chronic myelogenous leukemia, have long been recognized
in hematologic and mesenchymal malignancies. The recent finding of gene fusions in …
in hematologic and mesenchymal malignancies. The recent finding of gene fusions in …
[HTML][HTML] Identification of fusion genes in breast cancer by paired-end RNA-sequencing
H Edgren, A Murumagi, S Kangaspeska, D Nicorici… - Genome biology, 2011 - Springer
Background Until recently, chromosomal translocations and fusion genes have been an
underappreciated class of mutations in solid tumors. Next-generation sequencing …
underappreciated class of mutations in solid tumors. Next-generation sequencing …
The impact of translocations and gene fusions on cancer causation
F Mitelman, B Johansson, F Mertens - Nature Reviews Cancer, 2007 - nature.com
Chromosome aberrations, in particular translocations and their corresponding gene fusions,
have an important role in the initial steps of tumorigenesis; at present, 358 gene fusions …
have an important role in the initial steps of tumorigenesis; at present, 358 gene fusions …
An integrative approach to reveal driver gene fusions from paired-end sequencing data in cancer
XS Wang, JR Prensner, G Chen, Q Cao, B Han… - Nature …, 2009 - nature.com
Cancer genomes contain many aberrant gene fusions—a few that drive disease and many
more that are nonspecific passengers. We developed an algorithm (the concept signature …
more that are nonspecific passengers. We developed an algorithm (the concept signature …
[HTML][HTML] Development and clinical validation of a large fusion gene panel for pediatric cancers
Gene fusions are one of the most common genomic alterations in pediatric cancer. Many
fusions encode oncogenic drivers and play important roles in cancer diagnosis, risk …
fusions encode oncogenic drivers and play important roles in cancer diagnosis, risk …