[HTML][HTML] Solving PDEs in complex geometries: a diffuse domain approach

X Li, J Lowengrub, A Rätz, A Voigt - … in mathematical sciences, 2009 - ncbi.nlm.nih.gov
We extend previous work and present a general approach for solving partial differential
equations in complex, stationary, or moving geometries with Dirichlet, Neumann, and Robin …

An improvement of a recent Eulerian method for solving PDEs on general geometries

JB Greer - Journal of Scientific Computing, 2006 - Springer
We improve upon a method introduced in Bertalmio et al. 4 for solving evolution PDEs on
codimension-one surfaces in R^ N. As in the original method, by representing the surface as …

Velocity-induced numerical solutions of reaction-diffusion systems on continuously growing domains

A Madzvamuse, PK Maini - Journal of computational physics, 2007 - Elsevier
Reaction-diffusion systems have been widely studied in developmental biology, chemistry
and more recently in financial mathematics. Most of these systems comprise nonlinear …

Evolving interfaces via gradients of geometry-dependent interior Poisson problems: application to tumor growth

P Macklin, J Lowengrub - Journal of Computational Physics, 2005 - Elsevier
We develop an algorithm for the evolution of interfaces whose normal velocity is given by the
normal derivative of a solution to an interior Poisson equation with curvature-dependent …

A Cartesian grid embedded boundary method for Poisson's equation on irregular domains

H Johansen, P Colella - Journal of Computational Physics, 1998 - Elsevier
We present a numerical method for solving Poisson's equation, with variable coefficients
and Dirichlet boundary conditions, on two-dimensional regions. The approach uses a finite …

The surface finite element method for pattern formation on evolving biological surfaces

R Barreira, CM Elliott, A Madzvamuse - Journal of mathematical biology, 2011 - Springer
In this article we propose models and a numerical method for pattern formation on evolving
curved surfaces. We formulate reaction-diffusion equations on evolving surfaces using the …

PDE's on surfaces---a diffuse interface approach

A Rätz, A Voigt - 2006 - projecteuclid.org
We introduce a new approach to deal with the numerical solution of partial differential
equations on surfaces. Thereby we reformulate the problem on a larger domain in one …

Modeling and computation of two phase geometric biomembranes using surface finite elements

CM Elliott, B Stinner - Journal of Computational Physics, 2010 - Elsevier
Biomembranes consisting of multiple lipids may involve phase separation phenomena
leading to coexisting domains of different lipid compositions. The modeling of such …

A supra-convergent finite difference scheme for the Poisson and heat equations on irregular domains and non-graded adaptive Cartesian grids

H Chen, C Min, F Gibou - Journal of Scientific Computing, 2007 - Springer
We present finite difference schemes for solving the variable coefficient Poisson and heat
equations on irregular domains with Dirichlet boundary conditions. The computational …

Hierarchically refined and coarsened splines for moving interface problems, with particular application to phase-field models of prostate tumor growth

G Lorenzo, MA Scott, K Tew, TJR Hughes… - Computer Methods in …, 2017 - Elsevier
Moving interface problems are ubiquitous in science and engineering. To develop an
accurate and efficient methodology for this class of problems, we present algorithms for local …