[HTML][HTML] A deep survey of alternative splicing in grape reveals changes in the splicing machinery related to tissue, stress condition and genotype
Background Alternative splicing (AS) significantly enhances transcriptome complexity. It is
differentially regulated in a wide variety of cell types and plays a role in several cellular …
differentially regulated in a wide variety of cell types and plays a role in several cellular …
[HTML][HTML] Alternative splicing and protein diversity: plants versus animals
S Chaudhary, W Khokhar, I Jabre, ASN Reddy… - Frontiers in plant …, 2019 - frontiersin.org
Plants, unlike animals, exhibit a very high degree of plasticity in their growth and
development and employ diverse strategies to cope with the variations during diurnal cycles …
development and employ diverse strategies to cope with the variations during diurnal cycles …
Genome-wide mapping of alternative splicing in Arabidopsis thaliana
Alternative splicing can enhance transcriptome plasticity and proteome diversity. In plants,
alternative splicing can be manifested at different developmental stages, and is frequently …
alternative splicing can be manifested at different developmental stages, and is frequently …
[HTML][HTML] Identification of alternative splicing events by RNA sequencing in early growth tomato fruits
Y Sun, H Xiao - BMC genomics, 2015 - Springer
Background Alternative splicing (AS) regulates multiple biological processes including
flowering, circadian and stress response in plant. Although accumulating evidences indicate …
flowering, circadian and stress response in plant. Although accumulating evidences indicate …
Global identification of alternative splicing via comparative analysis of SMRT‐and Illumina‐based RNA‐seq in strawberry
Alternative splicing (AS) is a key post‐transcriptional regulatory mechanism, yet little
information is known about its roles in fruit crops. Here, AS was globally analyzed in the wild …
information is known about its roles in fruit crops. Here, AS was globally analyzed in the wild …
[HTML][HTML] Deciphering the plant splicing code: experimental and computational approaches for predicting alternative splicing and splicing regulatory elements
Extensive alternative splicing (AS) of precursor mRNAs (pre-mRNAs) in multicellular
eukaryotes increases the protein-coding capacity of a genome and allows novel ways to …
eukaryotes increases the protein-coding capacity of a genome and allows novel ways to …
Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis
Alternative splicing (AS) is a key regulatory mechanism that contributes to transcriptome and
proteome diversity. As very few genome-wide studies analyzing AS in plants are available …
proteome diversity. As very few genome-wide studies analyzing AS in plants are available …
Integrating omics and alternative splicing reveals insights into grape response to high temperature
J Jiang, X Liu, C Liu, G Liu, S Li, L Wang - Plant Physiology, 2017 - academic.oup.com
Heat stress is one of the primary abiotic stresses that limit crop production. Grape (Vitis
vinifera) is a cultivated fruit with high economic value throughout the world, with its growth …
vinifera) is a cultivated fruit with high economic value throughout the world, with its growth …
A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing
R Zhang, CPG Calixto, Y Marquez… - Nucleic acids …, 2017 - academic.oup.com
Alternative splicing generates multiple transcript and protein isoforms from the same gene
and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is …
and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is …
Alternative splicing: enhancing ability to cope with stress via transcriptome plasticity
AM Mastrangelo, D Marone, G Laidò, AM De Leonardis… - Plant Science, 2012 - Elsevier
Alternative splicing is a mechanism for the regulation of gene expression that is widespread
in higher eukaryotes. Genome-wide approaches, based on comparison of expressed and …
in higher eukaryotes. Genome-wide approaches, based on comparison of expressed and …