Functional mechanisms of microsatellite DNA in eukaryotic genomes

ATM Bagshaw - Genome biology and evolution, 2017 - academic.oup.com
Microsatellite repeat DNA is best known for its length mutability, which is implicated in
several neurological diseases and cancers, and often exploited as a genetic marker. Less …

The rise, fall and renaissance of microsatellites in eukaryotic genomes

E Buschiazzo, NJ Gemmell - Bioessays, 2006 - Wiley Online Library
Microsatellites are among the most versatile of genetic markers, being used in an impressive
number of biological applications. However, the evolutionary dynamics of these markers …

Microsatellites within genes: structure, function, and evolution

YC Li, AB Korol, T Fahima, E Nevo - Molecular biology and …, 2004 - academic.oup.com
Recently, increasingly more microsatellites, or simple sequence repeats (SSRs) have been
found and characterized within protein-coding genes and their untranslated regions (UTRs) …

The genome-wide determinants of human and chimpanzee microsatellite evolution

YD Kelkar, S Tyekucheva, F Chiaromonte… - Genome …, 2008 - genome.cshlp.org
Mutation rates of microsatellites vary greatly among loci. The causes of this heterogeneity
remain largely enigmatic yet are crucial for understanding numerous human neurological …

A genomic portrait of human microsatellite variation

BA Payseur, P Jing, RJ Haasl - Molecular biology and evolution, 2011 - academic.oup.com
Rapid advances in DNA sequencing and genotyping technologies are beginning to reveal
the scope and pattern of human genomic variation. Although single nucleotide …

DNA microsatellites: agents of evolution?

ER Moxon, C Wills - Scientific American, 1999 - JSTOR
Ahuman's genetic code consists of roughly three billion bases of DNA, the familiar “letters” of
the DNA al-phabet. But a mere 10 to 15 percent of those bases make up genes, the …

[HTML][HTML] Microsatellite tandem repeats are abundant in human promoters and are associated with regulatory elements

S Sawaya, A Bagshaw, E Buschiazzo, P Kumar… - PloS one, 2013 - journals.plos.org
Tandem repeats are genomic elements that are prone to changes in repeat number and are
thus often polymorphic. These sequences are found at a high density at the start of human …

Every microsatellite is different: Intrinsic DNA features dictate mutagenesis of common microsatellites present in the human genome

KA Eckert, SE Hile - … in cooperation with the University of Texas …, 2009 - Wiley Online Library
Microsatellite sequences are ubiquitous in the human genome and are important regulators
of genome function. Here, we examine the mutational mechanisms governing the stability of …

Abundance and length of simple repeats in vertebrate genomes are determined by their structural properties

A Bacolla, JE Larson, JR Collins, J Li… - Genome …, 2008 - genome.cshlp.org
Microsatellites are abundant in vertebrate genomes, but their sequence representation and
length distributions vary greatly within each family of repeats (eg, tetranucleotides) …

[HTML][HTML] Sequence determinants of human microsatellite variability

TJ Pemberton, CI Sandefur, M Jakobsson… - BMC genomics, 2009 - Springer
Background Microsatellite loci are frequently used in genomic studies of DNA sequence
repeats and in population studies of genetic variability. To investigate the effect of sequence …