[HTML][HTML] Automated anatomical labelling atlas 3

ET Rolls, CC Huang, CP Lin, J Feng, M Joliot - Neuroimage, 2020 - Elsevier
Following a first version AAL of the automated anatomical labeling atlas (Tzourio-Mazoyer et
al., 2002), a second version (AAL2)(Rolls et al., 2015) was developed that provided an …

Implementation of a new parcellation of the orbitofrontal cortex in the automated anatomical labeling atlas

ET Rolls, M Joliot, N Tzourio-Mazoyer - Neuroimage, 2015 - Elsevier
An alternative parcellation of the orbitofrontal cortex is described for the automated
anatomical labeling atlas of Tzourio-Mazoyer et al.(2002)(Automated anatomical labeling of …

[HTML][HTML] Mindboggle: automated brain labeling with multiple atlases

A Klein, B Mensh, S Ghosh, J Tourville, J Hirsch - BMC medical imaging, 2005 - Springer
Background To make inferences about brain structures or activity across multiple
individuals, one first needs to determine the structural correspondences across their image …

[HTML][HTML] The brain atlas concordance problem: quantitative comparison of anatomical parcellations

JW Bohland, H Bokil, CB Allen, PP Mitra - PloS one, 2009 - journals.plos.org
Many neuroscientific reports reference discrete macro-anatomical regions of the brain which
were delineated according to a brain atlas or parcellation protocol. Currently, however, no …

Mindboggle: a scatterbrained approach to automate brain labeling

A Klein, J Hirsch - NeuroImage, 2005 - Elsevier
Mindboggle (http://www. binarybottle. com/mindboggle. html) is a fully automated, feature
matching approach to label cortical structures and activity anatomically in human brain MRI …

An automated method for neuroanatomic and cytoarchitectonic atlas-based interrogation of fMRI data sets

JA Maldjian, PJ Laurienti, RA Kraft, JH Burdette - Neuroimage, 2003 - Elsevier
Analysis and interpretation of functional MRI (fMRI) data have traditionally been based on
identifying areas of significance on a thresholded statistical map of the entire imaged brain …

[HTML][HTML] A FreeSurfer view of the cortical transcriptome generated from the Allen Human Brain Atlas

L French, T Paus - Frontiers in neuroscience, 2015 - frontiersin.org
The Allen Human Brain Atlas provides an anatomically comprehensive view of gene
expression in the brain (Hawrylycz et al., 2012). The complete transcriptome dataset …

Automated Talairach atlas labels for functional brain mapping

JL Lancaster, MG Woldorff, LM Parsons… - Human brain …, 2000 - Wiley Online Library
An automated coordinate-based system to retrieve brain labels from the 1988 Talairach
Atlas, called the Talairach Daemon (TD), was previously introduced [Lancaster et al., 1997] …

[HTML][HTML] An extended Human Connectome Project multimodal parcellation atlas of the human cortex and subcortical areas

CC Huang, ET Rolls, J Feng, CP Lin - Brain Structure and Function, 2022 - Springer
A modified and extended version, HCPex, is provided of the surface-based Human
Connectome Project-MultiModal Parcellation atlas of human cortical areas (HCP-MMP v1. 0 …

[HTML][HTML] Processing pipeline for atlas-based imaging data analysis of structural and functional mouse brain MRI (AIDAmri)

N Pallast, M Diedenhofen, S Blaschke… - Frontiers in …, 2019 - frontiersin.org
Magnetic resonance imaging (MRI) is a key technology in multimodal animal studies of brain
connectivity and disease pathology. In vivo MRI provides non-invasive, whole brain …