Identification of drug–target interactions via dual laplacian regularized least squares with multiple kernel fusion

Y Ding, J Tang, F Guo - Knowledge-Based Systems, 2020 - Elsevier
Abstract Detection of Drug–Target Interactions (DTIs) is the time-consuming and laborious
experiment via biochemical approaches. Machine learning based methods have been …

Identification of drug–target interactions via fuzzy bipartite local model

Y Ding, J Tang, F Guo - Neural Computing and Applications, 2020 - Springer
With the emergence of large-scale experimental data on genes and proteins, drug discovery
and repositioning will be more difficult in the field of biomedical research. More and more …

Identification of drug–target interactions via multiple kernel-based triple collaborative matrix factorization

Y Ding, J Tang, F Guo, Q Zou - Briefings in Bioinformatics, 2022 - academic.oup.com
Targeted drugs have been applied to the treatment of cancer on a large scale, and some
patients have certain therapeutic effects. It is a time-consuming task to detect drug–target …

Neighborhood regularized logistic matrix factorization for drug-target interaction prediction

Y Liu, M Wu, C Miao, P Zhao, XL Li - PLoS computational biology, 2016 - journals.plos.org
In pharmaceutical sciences, a crucial step of the drug discovery process is the identification
of drug-target interactions. However, only a small portion of the drug-target interactions have …

Predicting drug-target interactions by dual-network integrated logistic matrix factorization

M Hao, SH Bryant, Y Wang - Scientific reports, 2017 - nature.com
In this work, we propose a dual-network integrated logistic matrix factorization (DNILMF)
algorithm to predict potential drug-target interactions (DTI). The prediction procedure …

Identification of drug-side effect association via multiple information integration with centered kernel alignment

Y Ding, J Tang, F Guo - Neurocomputing, 2019 - Elsevier
In medicine research, drug discovery aims to develop a drug to patients who will benefit from
it and try to avoid some side effects. However, the tradition experiment is time consuming …

Predicting drug-target interactions using Lasso with random forest based on evolutionary information and chemical structure

H Shi, S Liu, J Chen, X Li, Q Ma, B Yu - Genomics, 2019 - Elsevier
The identification of drug-target interactions has great significance for pharmaceutical
scientific research. Since traditional experimental methods identifying drug-target …

A multiple kernel learning algorithm for drug-target interaction prediction

ACA Nascimento, RBC Prudêncio, IG Costa - BMC bioinformatics, 2016 - Springer
Background Drug-target networks are receiving a lot of attention in late years, given its
relevance for pharmaceutical innovation and drug lead discovery. Different in silico …

SFLLN: a sparse feature learning ensemble method with linear neighborhood regularization for predicting drug–drug interactions

W Zhang, K Jing, F Huang, Y Chen, B Li, J Li… - Information Sciences, 2019 - Elsevier
Drug–drug interactions are one of the major concerns of drug discovery, and the accurate
prediction of drug–drug interactions is important for drug safety surveillance. However, most …

A deep learning-based method for drug-target interaction prediction based on long short-term memory neural network

YB Wang, ZH You, S Yang, HC Yi, ZH Chen… - BMC medical informatics …, 2020 - Springer
Background The key to modern drug discovery is to find, identify and prepare drug
molecular targets. However, due to the influence of throughput, precision and cost …