[HTML][HTML] Genome-wide cross-cancer analysis illustrates the critical role of bimodal miRNA in patient survival and drug responses to PI3K inhibitors

L Moody, GB Xu, YX Pan, H Chen - PLoS computational biology, 2022 - journals.plos.org
Heterogeneity of cancer means many tumorigenic genes are only aberrantly expressed in a
subset of patients and thus follow a bimodal distribution, having two modes of expression …

Integrative analysis reveals disrupted pathways regulated by microRNAs in cancer

G Wilk, R Braun - Nucleic Acids Research, 2018 - academic.oup.com
MicroRNAs (miRNAs) are small endogenous regulatory molecules that modulate gene
expression post-transcriptionally. Although differential expression of miRNAs have been …

[HTML][HTML] MicroRNAs and the cancer phenotype: profiling, signatures and clinical implications

C Stahlhut, FJ Slack - Genome medicine, 2013 - Springer
MicroRNAs (miRNAs) have emerged as key genetic regulators of a wide variety of biological
processes, including growth, proliferation, and survival. Recent advances have led to the …

[HTML][HTML] Integrative analysis of TCGA data identifies miRNAs as drug-specific survival biomarkers

S Lin, J Zhou, Y Xiao, B Neary, Y Teng, P Qiu - Scientific Reports, 2022 - nature.com
Biomarkers predictive of drug-specific outcomes are important tools for personalized
medicine. In this study, we present an integrative analysis to identify miRNAs that are …

OncomiR: an online resource for exploring pan-cancer microRNA dysregulation

NW Wong, Y Chen, S Chen, X Wang - Bioinformatics, 2018 - academic.oup.com
Dysregulation of microRNAs (miRNAs) is extensively associated with cancer development
and progression. miRNAs have been shown to be biomarkers for predicting tumor formation …

[HTML][HTML] Pan-cancer analysis reveals cooperativity of both strands of microRNA that regulate tumorigenesis and patient survival

R Mitra, CM Adams, W Jiang, E Greenawalt… - Nature …, 2020 - nature.com
Recently, both 5p and 3p miRNA strands are being recognized as functional instead of only
one, leaving many miRNA strands uninvestigated. To determine whether both miRNA …

CancerMIRNome: an interactive analysis and visualization database for miRNome profiles of human cancer

R Li, H Qu, S Wang, JM Chater, X Wang… - Nucleic acids …, 2022 - academic.oup.com
MicroRNAs (miRNAs), which play critical roles in gene regulatory networks, have emerged
as promising diagnostic and prognostic biomarkers for human cancer. In particular …

[HTML][HTML] Novel rank-based statistical methods reveal microRNAs with differential expression in multiple cancer types

R Navon, H Wang, I Steinfeld, A Tsalenko, A Ben-Dor… - PloS one, 2009 - journals.plos.org
Background microRNAs (miRNAs) regulate target genes at the post-transcriptional level and
play important roles in cancer pathogenesis and development. Variation amongst …

[HTML][HTML] Integrated analysis of microRNA-target interactions with clinical outcomes for cancers

JG Joung, D Kim, SY Lee, HJ Kang, JH Kim - BMC Medical Genomics, 2014 - Springer
Background Clinical statement alone is not enough to predict the progression of disease.
Instead, the gene expression profiles have been widely used to forecast clinical outcomes …

Pan-cancer analysis of canonical and modified miRNAs enhances the resolution of the functional miRNAome in cancer

R Distefano, L Tomasello, GL Rampioni Vinciguerra… - Cancer research, 2022 - AACR
Epitranscriptomic studies of miRNAs have added a new layer of complexity to the cancer
field. Although there is fast-growing interest in adenosine-to-inosine (A-to-I) miRNA editing …