Periodic perturbation of genetic oscillations
VP Zhdanov - Chaos, Solitons & Fractals, 2012 - Elsevier
Kinetics of gene expression may be oscillatory due to the feedbacks between the mRNA,
non-coding RNA and protein synthesis. In complex genetic networks, the kinetic oscillations …
non-coding RNA and protein synthesis. In complex genetic networks, the kinetic oscillations …
Periodic perturbation of the bistable kinetics of gene expression
VP Zhdanov - Physica A: Statistical Mechanics and its Applications, 2011 - Elsevier
Kinetics of gene expression may be bistable or oscillatory due to the feedbacks between the
RNA and protein synthesis. In complex genetic networks, kinetic oscillations may influence …
RNA and protein synthesis. In complex genetic networks, kinetic oscillations may influence …
Fluctuations of mRNA distributions in multiple pathway activated transcription.
G Lin, J Yu, Z Zhou, Q Sun… - Discrete & Continuous …, 2019 - search.ebscohost.com
Randomness in gene transcription can result in fluctuations (noise) of messenger RNA
(mRNA) levels, leading to phenotypic plasticity in the isogenic populations of cells. Recent …
(mRNA) levels, leading to phenotypic plasticity in the isogenic populations of cells. Recent …
Formulas for intrinsic noise evaluation in oscillatory genetic networks
Y Ito, K Uchida - Journal of theoretical biology, 2010 - Elsevier
The linear noise approximation is a useful method for stochastic noise evaluations in genetic
regulatory networks, where the covariance equation described as a Lyapunov equation …
regulatory networks, where the covariance equation described as a Lyapunov equation …
Role of cooperative binding on noise expression
PS Gutierrez, D Monteoliva, L Diambra - Physical Review E—Statistical …, 2009 - APS
The origin of stochastic fluctuations in gene expression has received considerable attention
recently. Fluctuations in gene expression are particularly pronounced in cellular systems …
recently. Fluctuations in gene expression are particularly pronounced in cellular systems …
Roles of noise in single and coupled multiple genetic oscillators
M Yoda, T Ushikubo, W Inoue, M Sasai - The Journal of chemical …, 2007 - pubs.aip.org
The noisy fluctuation of chemical reactions should profoundly affect the oscillatory dynamics
of gene circuit. In this paper a prototypical genetic oscillator, repressilator, is numerically …
of gene circuit. In this paper a prototypical genetic oscillator, repressilator, is numerically …
[HTML][HTML] How reliable is the linear noise approximation of gene regulatory networks?
Background The linear noise approximation (LNA) is commonly used to predict how noise is
regulated and exploited at the cellular level. These predictions are exact for reaction …
regulated and exploited at the cellular level. These predictions are exact for reaction …
Spatio-temporal models of synthetic genetic oscillators
CK Macnamara, MAJ Chaplain - Mathematical Biosciences and …, 2017 - eprints.gla.ac.uk
Signal transduction pathways play a major role in many important aspects of cellular
function eg cell division, apoptosis. One important class of signal transduction pathways is …
function eg cell division, apoptosis. One important class of signal transduction pathways is …
[HTML][HTML] Fluctuations and slow variables in genetic networks
R Bundschuh, F Hayot, C Jayaprakash - Biophysical journal, 2003 - cell.com
Computer simulations of large genetic networks are often extremely time consuming
because, in addition to the biologically interesting translation and transcription reactions …
because, in addition to the biologically interesting translation and transcription reactions …
Dynamics of molecular fluctuations in gene regulatory networks
VH Pakka - 2009 - eprints.soton.ac.uk
The components that are central to cellular processing are proteins, whose production is
regulated by other proteins known as transcription factors. Proteins are products of genes …
regulated by other proteins known as transcription factors. Proteins are products of genes …