Spatial genomics enables multi-modal study of clonal heterogeneity in tissues
The state and behaviour of a cell can be influenced by both genetic and environmental
factors. In particular, tumour progression is determined by underlying genetic aberrations …
factors. In particular, tumour progression is determined by underlying genetic aberrations …
Spatially resolved clonal copy number alterations in benign and malignant tissue
A Erickson, M He, E Berglund, M Marklund… - Nature, 2022 - nature.com
Defining the transition from benign to malignant tissue is fundamental to improving early
diagnosis of cancer. Here we use a systematic approach to study spatial genome integrity in …
diagnosis of cancer. Here we use a systematic approach to study spatial genome integrity in …
Spatial genomics maps the structure, nature and evolution of cancer clones
Genome sequencing of cancers often reveals mosaics of different subclones present in the
same tumour,–. Although these are believed to arise according to the principles of somatic …
same tumour,–. Although these are believed to arise according to the principles of somatic …
Genetic effects on gene expression across human tissues
GTEx Consortium Lead analysts: Aguet François 1 … - Nature, 2017 - nature.com
Abstract Characterization of the molecular function of the human genome and its variation
across individuals is essential for identifying the cellular mechanisms that underlie human …
across individuals is essential for identifying the cellular mechanisms that underlie human …
Slide-tags enables single-nucleus barcoding for multimodal spatial genomics
Recent technological innovations have enabled the high-throughput quantification of gene
expression and epigenetic regulation within individual cells, transforming our understanding …
expression and epigenetic regulation within individual cells, transforming our understanding …
Extensive transcriptional heterogeneity revealed by isoform profiling
Transcript function is determined by sequence elements arranged on an individual RNA
molecule. Variation in transcripts can affect messenger RNA stability, localization and …
molecule. Variation in transcripts can affect messenger RNA stability, localization and …
Tumour evolution inferred by single-cell sequencing
N Navin, J Kendall, J Troge, P Andrews, L Rodgers… - Nature, 2011 - nature.com
Genomic analysis provides insights into the role of copy number variation in disease, but
most methods are not designed to resolve mixed populations of cells. In tumours, where …
most methods are not designed to resolve mixed populations of cells. In tumours, where …
The deepest differences
C Schubert - Nature, 2011 - nature.com
The deepest differences | Nature Skip to main content Thank you for visiting nature.com. You
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[HTML][HTML] Spatial profiling of chromatin accessibility in mouse and human tissues
Cellular function in tissue is dependent on the local environment, requiring new methods for
spatial mapping of biomolecules and cells in the tissue context. The emergence of spatial …
spatial mapping of biomolecules and cells in the tissue context. The emergence of spatial …
Exploring tissue architecture using spatial transcriptomics
Deciphering the principles and mechanisms by which gene activity orchestrates complex
cellular arrangements in multicellular organisms has far-reaching implications for research …
cellular arrangements in multicellular organisms has far-reaching implications for research …