Single-Macromolecule Studies of Eukaryotic Genomic Maintenance
S Rudnizky, PJ Murray, CH Wolfe… - Annual Review of …, 2024 - annualreviews.org
Genomes are self-organized and self-maintained as long, complex macromolecules of
chromatin. The inherent heterogeneity, stochasticity, phase separation, and chromatin …
chromatin. The inherent heterogeneity, stochasticity, phase separation, and chromatin …
[HTML][HTML] Genome organization: balancing stability and plasticity
M Wachsmuth, M Caudron-Herger, K Rippe - Biochimica et Biophysica Acta …, 2008 - Elsevier
The cell needs to stably maintain its genome and protect it from uncontrolled modifications
that would compromise its function. At the same time, the genome has to be a plastic …
that would compromise its function. At the same time, the genome has to be a plastic …
The self-stirred genome: large-scale chromatin dynamics, its biophysical origins and implications
A Zidovska - Current opinion in genetics & development, 2020 - Elsevier
The organization and dynamics of human genome govern all cellular processes—directly
impacting the central dogma of biology—yet are poorly understood, especially at large …
impacting the central dogma of biology—yet are poorly understood, especially at large …
Studying genomic processes at the single-molecule level: introducing the tools and applications
To understand genomic processes such as transcription, translation or splicing, we need to
be able to study their spatial and temporal organization at the molecular level. Single …
be able to study their spatial and temporal organization at the molecular level. Single …
Dynamic chromatin technologies: from individual molecules to epigenomic regulation in cells
The establishment and maintenance of chromatin states involves multiscale dynamic
processes integrating transcription factor and multiprotein effector dynamics, cycles of …
processes integrating transcription factor and multiprotein effector dynamics, cycles of …
Spatial organization of chromosomes leads to heterogeneous chromatin motion and drives the liquid-or gel-like dynamical behavior of chromatin
Chromosome organization and dynamics are involved in regulating many fundamental
processes such as gene transcription and DNA repair. Experiments unveiled that chromatin …
processes such as gene transcription and DNA repair. Experiments unveiled that chromatin …
The polymorphisms of the chromatin fiber
JB Boulé, J Mozziconacci… - Journal of Physics …, 2014 - iopscience.iop.org
In eukaryotes, the genome is packed into chromosomes, each consisting of large polymeric
fibers made of DNA bound with proteins (mainly histones) and RNA molecules. The nature …
fibers made of DNA bound with proteins (mainly histones) and RNA molecules. The nature …
Epigenomics and the structure of the living genome
N Friedman, OJ Rando - Genome research, 2015 - genome.cshlp.org
Eukaryotic genomes are packaged into an extensively folded state known as chromatin.
Analysis of the structure of eukaryotic chromosomes has been revolutionized by …
Analysis of the structure of eukaryotic chromosomes has been revolutionized by …
[HTML][HTML] Understanding and engineering chromatin as a dynamical system across length and timescales
Connecting the molecular structure and function of chromatin across length and timescales
remains a grand challenge to understanding and engineering cellular behaviors. Across five …
remains a grand challenge to understanding and engineering cellular behaviors. Across five …
[HTML][HTML] Exploring molecular biology in sequence space: the road to next-generation single-molecule biophysics
I Severins, C Joo, J van Noort - Molecular Cell, 2022 - cell.com
Next-generation sequencing techniques have led to a new quantitative dimension in the
biological sciences. In particular, integrating sequencing techniques with biophysical tools …
biological sciences. In particular, integrating sequencing techniques with biophysical tools …