7 Horizontal Gene Transfer and Microevolution in Soil

KM Nielsen, JD van Elsas - Modern Soil Microbiology, 2019 - books.google.com
High-throughput (genomics and metagenomics) methods for DNA sequencing have now
cataloged the composition of thousands of bacterial genomes, including those of many soil …

Horizontal gene transfer and microevolution in soil

KM Nielsen, JD Van Elsas - Modern Soil Microbiology, Third …, 2019 - taylorfrancis.com
High-throughput methods for DNA sequencing have cataloged the composition of
thousands of bacterial genomes, including those of many soil bacteria. Regardless of the …

Genome-resolved metagenomics is essential for unlocking the microbial black box of the soil

LN Lemos, LW Mendes, P Baldrian, VS Pylro - Trends in Microbiology, 2021 - cell.com
Despite several efforts to unravel the microbial diversity of soil, most microbes are still
unknown. A recent large-scale effort based on genome-resolved metagenomics by Nayfach …

Accessing the soil metagenome for studies of microbial diversity

TO Delmont, P Robe, S Cecillon, IM Clark… - Applied and …, 2011 - Am Soc Microbiol
Soil microbial communities contain the highest level of prokaryotic diversity of any
environment, and metagenomic approaches involving the extraction of DNA from soil can …

[HTML][HTML] Towards uncultured-microbe genomics

J Cotton - Genome Biology, 2000 - Springer
Towards uncultured-microbe genomics | Genome Biology Skip to main content SpringerLink
Account Menu Find a journal Publish with us Track your research Search Cart 1.Home …

[HTML][HTML] Back to the future of soil metagenomics

J Nesme, W Achouak, SN Agathos, M Bailey… - Frontiers in …, 2016 - frontiersin.org
Direct extraction and characterization of microbial community DNA through PCR amplicon
surveys and metagenomics has revolutionized the study of environmental microbiology and …

[HTML][HTML] Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics

TO Delmont, AM Eren, L Maccario, E Prestat… - Frontiers in …, 2015 - frontiersin.org
Despite extensive direct sequencing efforts and advanced analytical tools, reconstructing
microbial genomes from soil using metagenomics have been challenging due to the …

The study from gene to ecosystems for soil microbial diversity in benefit to plant

H Wijaya, R Simarmata, M Christita, RFW Putrie… - Microbiome Drivers of …, 2024 - Elsevier
Soils support an enormous diversity of microorganisms, much of which is yet unknown. Soil
microbes may colonize the rhizosphere and can be transmitted to endophytes, which live …

[HTML][HTML] TerraGenome: a consortium for the sequencing of a soil metagenome

TM Vogel, P Simonet, JK Jansson, PR Hirsch… - Nature Reviews …, 2009 - nature.com
TerraGenome: a consortium for the sequencing of a soil metagenome | Nature Reviews
Microbiology Skip to main content Thank you for visiting nature.com. You are using a browser …

To sequence or not to sequence the whole-soil metagenome?

PC Baveye - Nature Reviews Microbiology, 2009 - nature.com
The recent editorial by Timothy Vogel et al.(TerraGenome: a consortium for the sequencing
of a whole-soil metagenome. Nature Rev. Microbiol. 7, 252 (2009)) 1 appears to represent a …