Toward a comprehensive characterization of a human cancer cell phosphoproteome

H Zhou, S Di Palma, C Preisinger, M Peng… - Journal of proteome …, 2013 - ACS Publications
Mass spectrometry (MS)-based phosphoproteomics has achieved extraordinary success in
qualitative and quantitative analysis of cellular protein phosphorylation. Considering that an …

A data-independent acquisition-based global phosphoproteomics system enables deep profiling

RB Kitata, WK Choong, CF Tsai, PY Lin… - Nature …, 2021 - nature.com
Phosphoproteomics can provide insights into cellular signaling dynamics. To achieve deep
and robust quantitative phosphoproteomics profiling for minute amounts of sample, we here …

Catch me if you can: mass spectrometry‐based phosphoproteomics and quantification strategies

B Eyrich, A Sickmann, RP Zahedi - Proteomics, 2011 - Wiley Online Library
Phosphorylation of proteins is one of the most prominent PTMs and for instance a key
regulator of signal transduction. In order to improve our understanding of cellular …

[HTML][HTML] Phosphoproteomics in cancer

HC Harsha, A Pandey - Molecular oncology, 2010 - Elsevier
Reversible protein phosphorylation serves as a basis for regulating a number of cellular
processes. Aberrant activation of kinase signaling pathways is commonly associated with …

High-throughput and high-sensitivity phosphoproteomics with the EasyPhos platform

SJ Humphrey, O Karayel, DE James, M Mann - Nature protocols, 2018 - nature.com
Mass spectrometry has transformed the field of cell signaling by enabling global studies of
dynamic protein phosphorylation ('phosphoproteomics'). Recent developments are enabling …

Mining the tumor phosphoproteome for cancer markers

YP Lim - Clinical cancer research, 2005 - AACR
Despite decades of cancer research, mortality rates remain high largely due to the failure of
early detection, poor understanding of the epidemiology of rational drug targets, and …

Benchmarking common quantification strategies for large-scale phosphoproteomics

A Hogrebe, L von Stechow, DB Bekker-Jensen… - Nature …, 2018 - nature.com
Comprehensive mass spectrometry (MS)-based proteomics is now feasible, but
reproducible quantification remains challenging, especially for post-translational …

Phosphoproteomics for the masses

PA Grimsrud, DL Swaney, CD Wenger… - ACS chemical …, 2010 - ACS Publications
Protein phosphorylation serves as a primary mechanism of signal transduction in the cells of
biological organisms. Technical advancements over the last several years in mass …

Analytical strategies for phosphoproteomics

TE Thingholm, ON Jensen, MR Larsen - Proteomics, 2009 - Wiley Online Library
Protein phosphorylation is a key regulator of cellular signaling pathways. It is involved in
most cellular events in which the complex interplay between protein kinases and protein …

A review on recent trends in the phosphoproteomics workflow. From sample preparation to data analysis

J Urban - Analytica Chimica Acta, 2022 - Elsevier
Phosphorylation is one of the quickest post-translational modifications that controls
downstream signaling pathways regulating processes like cell proliferation, survival, and …