[HTML][HTML] Structure-based virtual screening: from classical to artificial intelligence

EHB Maia, LC Assis, TA De Oliveira… - Frontiers in …, 2020 - frontiersin.org
The drug development process is a major challenge in the pharmaceutical industry since it
takes a substantial amount of time and money to move through all the phases of developing …

[HTML][HTML] Virtual screening algorithms in drug discovery: A review focused on machine and deep learning methods

TA Oliveira, MP Silva, EHB Maia, AM Silva… - Drugs and Drug …, 2023 - mdpi.com
Drug discovery and repositioning are important processes for the pharmaceutical industry.
These processes demand a high investment in resources and are time-consuming. Several …

[HTML][HTML] Structure-based virtual screening for drug discovery: a problem-centric review

T Cheng, Q Li, Z Zhou, Y Wang, SH Bryant - The AAPS journal, 2012 - Springer
Abstract Structure-based virtual screening (SBVS) has been widely applied in early-stage
drug discovery. From a problem-centric perspective, we reviewed the recent advances and …

Structure-based virtual screening

Q Li, S Shah - Protein Bioinformatics: From Protein Modifications and …, 2017 - Springer
Abstract Structure-based virtual screening (SBVS) is a computational approach used in the
early-stage drug discovery campaign to search a chemical compound library for novel …

[HTML][HTML] Empirical scoring functions for structure-based virtual screening: applications, critical aspects, and challenges

IA Guedes, FSS Pereira, LE Dardenne - Frontiers in pharmacology, 2018 - frontiersin.org
Structure-based virtual screening (VS) is a widely used approach that employs the
knowledge of the three-dimensional structure of the target of interest in the design of new …

Combined strategies in structure-based virtual screening

Z Wang, H Sun, C Shen, X Hu, J Gao, D Li… - Physical Chemistry …, 2020 - pubs.rsc.org
The identification and optimization of lead compounds are inalienable components in drug
design and discovery pipelines. As a powerful computational approach for the identification …

Virtual screening and its integration with modern drug design technologies

AD Andricopulo, RVC Guido… - Current medicinal …, 2008 - ingentaconnect.com
Drug discovery is a highly complex and costly process, which demands integrated efforts in
several relevant aspects involving innovation, knowledge, information, technologies …

Benchmarking data sets for the evaluation of virtual ligand screening methods: review and perspectives

N Lagarde, JF Zagury, M Montes - Journal of chemical information …, 2015 - ACS Publications
Virtual screening methods are commonly used nowadays in drug discovery processes.
However, to ensure their reliability, they have to be carefully evaluated. The evaluation of …

Selecting machine-learning scoring functions for structure-based virtual screening

PJ Ballester - Drug discovery today: technologies, 2019 - Elsevier
Interest in docking technologies has grown parallel to the ever increasing number and
diversity of 3D models for macromolecular therapeutic targets. Structure-Based Virtual …

Novel technologies for virtual screening

T Lengauer, C Lemmen, M Rarey, M Zimmermann - Drug discovery today, 2004 - Elsevier
There are several methods for virtual screening of databases of small organic compounds to
find tight binders to a given protein target. Recent reviews in Drug Discovery Today have …