Simple Behavioral Analysis (SimBA) as a platform for explainable machine learning in behavioral neuroscience
NL Goodwin, JJ Choong, S Hwang, K Pitts… - Nature …, 2024 - nature.com
The study of complex behaviors is often challenging when using manual annotation due to
the absence of quantifiable behavioral definitions and the subjective nature of behavioral …
the absence of quantifiable behavioral definitions and the subjective nature of behavioral …
Toward the explainability, transparency, and universality of machine learning for behavioral classification in neuroscience
The use of rigorous ethological observation via machine learning techniques to understand
brain function (computational neuroethology) is a rapidly growing approach that is poised to …
brain function (computational neuroethology) is a rapidly growing approach that is poised to …
A-SOiD, an active learning platform for expert-guided, data efficient discovery of behavior
Behavior identification and quantification techniques have undergone rapid development.
To this end, supervised or unsupervised methods are chosen based upon their intrinsic …
To this end, supervised or unsupervised methods are chosen based upon their intrinsic …
Simple Behavioral Analysis (SimBA)–an open source toolkit for computer classification of complex social behaviors in experimental animals
Aberrant social behavior is a core feature of many neuropsychiatric disorders, yet the study
of complex social behavior in freely moving rodents is relatively infrequently incorporated …
of complex social behavior in freely moving rodents is relatively infrequently incorporated …
Automated behavioral scoring: Do we even need humans?
W Kenkel - Annals of the New York Academy of Sciences, 2023 - Wiley Online Library
The development of automated behavior scoring technology has been a tremendous boon
to the study of social behavior. However, completely outsourcing behavioral analysis to a …
to the study of social behavior. However, completely outsourcing behavioral analysis to a …
Machine Learning Driven Developments in Behavioral Annotation: A Recent Historical Review
E Watson, T Viana, S Zhang - International Journal of Social Robotics, 2024 - Springer
Annotation tools serve a critical role in the generation of datasets that fuel machine learning
applications. With the advent of Foundation Models, particularly those based on Transformer …
applications. With the advent of Foundation Models, particularly those based on Transformer …
Automating behavioral analysis in neuroscience: Development of an open-source python software for more consistent and reliable results
A Cerveira, BAC Ramalho, CCB de Souza… - Journal of Neuroscience …, 2023 - Elsevier
Background: The application of automated analyses in neuroscience has become a
practical approach. With automation, the algorithms and tools employed perform fast and …
practical approach. With automation, the algorithms and tools employed perform fast and …
HUB-DT: a tool for unsupervised behavioural discovery and analysis
A Lindsay, JK Seamans - bioRxiv, 2024 - biorxiv.org
There has been an expansion in the diversity of tools used to measure various aspects of
brain function in behaving animals. While these tools have great potential to transform our …
brain function in behaving animals. While these tools have great potential to transform our …
Open-source software for automated rodent behavioral analysis
S Isik, G Unal - Frontiers in Neuroscience, 2023 - frontiersin.org
Rodent behavioral analysis is a major specialization in experimental psychology and
behavioral neuroscience. Rodents display a wide range of species-specific behaviors, not …
behavioral neuroscience. Rodents display a wide range of species-specific behaviors, not …
A-SOiD, an active-learning platform for expert-guided, data-efficient discovery of behavior
To identify and extract naturalistic behavior, two methods have become popular: supervised
and unsupervised. Each approach carries its own strengths and weaknesses (for example …
and unsupervised. Each approach carries its own strengths and weaknesses (for example …