Simple sequence repeat markers in genetic divergence and marker-assisted selection of rice cultivars: a review

S Kaur, PS Panesar, MB Bera… - Critical Reviews in Food …, 2015 - Taylor & Francis
Sequencing of rice genome has facilitated the understanding of rice evolution and has been
utilized extensively for mining of DNA markers to facilitate marker-assisted breeding. Simple …

[HTML][HTML] Evaluation of SSR and SNP markers for molecular breeding in rice

ZJ Gonzaga, K Aslam, EM Septiningsih, BCY Collard - 2015 - plantbreedbio.org
Simple sequence repeats (SSRs) have been the marker of choice for rice molecular
breeding due to the high level of polymorphism, technical simplicity and low cost. Recent …

A marker‐based approach to broadening the genetic base of rice in the USA

Y Xu, H Beachell, SR McCOUCH - Crop science, 2004 - Wiley Online Library
The narrow genetic base of US rice (Oryza sativa L.) cultivars poses a challenge for long‐
term improvements of yield and other agronomic traits. Molecular marker analysis can be …

Resequencing rice genomes: an emerging new era of rice genomics

X Huang, T Lu, B Han - Trends in Genetics, 2013 - cell.com
Rice is a model system for crop genomics studies. Much of the early work on rice genomics
focused on analyzing genome-wide genetic variation to further understand rice gene …

Genome-wide development of novel miRNA-based microsatellite markers of rice (Oryza sativa) for genotyping applications

SA Ganie, TK Mondal - Molecular breeding, 2015 - Springer
Rice (Oryza sativa L.) plays a crucial role in assuring food security to the world's population
and is recognized as a superior model plant of monocot crops. Molecular markers …

[HTML][HTML] Integration of genomics into rice breeding

S Fukuoka, K Ebana, T Yamamoto, M Yano - Rice, 2010 - Springer
One of the major challenges in genetics has been to identify the nucleotide polymorphisms
responsible for phenotypic variation. Through intensive analysis, several major quantitative …

Ricebase: a breeding and genetics platform for rice, integrating individual molecular markers, pedigrees and whole-genome-based data

JD Edwards, AM Baldo, LA Mueller - Database, 2016 - academic.oup.com
Abstract Ricebase (http://ricebase. org) is an integrative genomic database for rice (Oryza
sativa) with an emphasis on combining datasets in a way that maintains the key links …

Microsatellite marker-mediated analysis of the EMBRAPA Rice Core Collection genetic diversity

TC de Oliveira Borba, RPV Brondani, PHN Rangel… - Genetica, 2009 - Springer
The objectives of this study were to determine the genetic structure of 242 accessions from
the EMBRAPA Rice Core Collection (ERiCC), to create a mini-core collection and to develop …

Rice molecular breeding laboratories in the genomics era: current status and future considerations

BCY Collard, CM Vera Cruz, KL McNally… - … journal of plant …, 2008 - Wiley Online Library
Using DNA markers in plant breeding with marker‐assisted selection (MAS) could greatly
improve the precision and efficiency of selection, leading to the accelerated development of …

Genetic variability analysis of elite upland rice genotypes with SSR markers.

C Brondani, KS Caldeira, TCO Borba, R PN… - 2006 - alice.cnptia.embrapa.br
Rice is one of the staple foods consumed worldwide, and rice breeding programs have
become important to warrant high yield levels and grain quality in upland rice. This study …