Steering and controlling evolution—from bioengineering to fighting pathogens
M Lässig, V Mustonen, A Nourmohammad - Nature Reviews Genetics, 2023 - nature.com
Control interventions steer the evolution of molecules, viruses, microorganisms or other cells
towards a desired outcome. Applications range from engineering biomolecules and …
towards a desired outcome. Applications range from engineering biomolecules and …
Steering eco-evolutionary game dynamics with manifold control
Feedback loops between population dynamics of individuals and their ecological
environment are ubiquitously found in nature and have shown profound effects on the …
environment are ubiquitously found in nature and have shown profound effects on the …
Controlling the speed and trajectory of evolution with counterdiabatic driving
The pace and unpredictability of evolution are critically relevant in a variety of modern
challenges, such as combating drug resistance in pathogens and cancer, understanding …
challenges, such as combating drug resistance in pathogens and cancer, understanding …
Feedback control as a framework for understanding tradeoffs in biology
Control theory arose from a need to control synthetic systems. From regulating steam
engines to tuning radios to devices capable of autonomous movement, it provided a formal …
engines to tuning radios to devices capable of autonomous movement, it provided a formal …
Control theory for synthetic biology: recent advances in system characterization, control design, and controller implementation for synthetic biology
V Hsiao, A Swaminathan… - IEEE Control Systems …, 2018 - ieeexplore.ieee.org
Living organisms are differentiated by their genetic material-millions to billions of DNA bases
encoding thousands of genes. These genes are translated into a vast array of proteins …
encoding thousands of genes. These genes are translated into a vast array of proteins …
Engineering microbial systems to explore ecological and evolutionary dynamics
A major goal of biological research is to provide a mechanistic understanding of diverse
biological processes. To this end, synthetic biology offers a powerful approach, whereby …
biological processes. To this end, synthetic biology offers a powerful approach, whereby …
[HTML][HTML] Biological feedback control—Respect the loops
H El-Samad - Cell Systems, 2021 - cell.com
We, and all organisms, are an evolutionary masterpiece of multiscale feedback control.
Feedback loops enable our cells to grow and then stop at the right size, to divide and self …
Feedback loops enable our cells to grow and then stop at the right size, to divide and self …
Future systems and control research in synthetic biology
Synthetic biology is the application of engineering principles to the fundamental components
of biology, with the aim of creating systems with novel functionalities that can be used for …
of biology, with the aim of creating systems with novel functionalities that can be used for …
[HTML][HTML] Formal definitions of unbounded evolution and innovation reveal universal mechanisms for open-ended evolution in dynamical systems
Open-ended evolution (OEE) is relevant to a variety of biological, artificial and technological
systems, but has been challenging to reproduce in silico. Most theoretical efforts focus on …
systems, but has been challenging to reproduce in silico. Most theoretical efforts focus on …
Cybergenetics: Theory and methods for genetic control system
M Khammash, M Di Bernardo… - 2019 IEEE 58th …, 2019 - ieeexplore.ieee.org
This tutorial article gives an overview of the theory and design tools for the real-time control
of living cells. The theoretical, computational, and experimental tools and technologies …
of living cells. The theoretical, computational, and experimental tools and technologies …