Venn diagrams in bioinformatics

A Jia, L Xu, Y Wang - Briefings in bioinformatics, 2021 - academic.oup.com
Venn diagrams are widely used tools for graphical depiction of the unions, intersections and
distinctions among multiple datasets, and a large number of programs have been developed …

InteractiVenn: a web-based tool for the analysis of sets through Venn diagrams

H Heberle, GV Meirelles, FR da Silva, GP Telles… - BMC …, 2015 - Springer
Background Set comparisons permeate a large number of data analysis workflows, in
particular workflows in biological sciences. Venn diagrams are frequently employed for such …

BioVenn–a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams

T Hulsen, J de Vlieg, W Alkema - BMC genomics, 2008 - Springer
Background In many genomics projects, numerous lists containing biological identifiers are
produced. Often it is useful to see the overlap between different lists, enabling researchers to …

VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R

H Chen, PC Boutros - BMC bioinformatics, 2011 - Springer
Background Visualization of orthogonal (disjoint) or overlapping datasets is a common task
in bioinformatics. Few tools exist to automate the generation of extensively-customizable …

jvenn: an interactive Venn diagram viewer

P Bardou, J Mariette, F Escudié, C Djemiel, C Klopp - BMC bioinformatics, 2014 - Springer
Background Venn diagrams are commonly used to display list comparison. In biology, they
are widely used to show the differences between gene lists originating from different …

ggVennDiagram: an intuitive, easy-to-use, and highly customizable R package to generate Venn diagram

CH Gao, G Yu, P Cai - Frontiers in Genetics, 2021 - frontiersin.org
Venn diagrams are widely used diagrams to show the set relationships in biomedical
studies. In this study, we developed ggVennDiagram, an R package that could automatically …

eulerAPE: Drawing Area-Proportional 3-Venn Diagrams Using Ellipses

L Micallef, P Rodgers - PloS one, 2014 - journals.plos.org
Venn diagrams with three curves are used extensively in various medical and scientific
disciplines to visualize relationships between data sets and facilitate data analysis. The area …

nVenn: generalized, quasi-proportional Venn and Euler diagrams

JG Pérez-Silva, M Araujo-Voces, V Quesada - Bioinformatics, 2018 - academic.oup.com
Abstract Motivation Venn and Euler diagrams are extensively used for the visualization of
relationships between experiments and datasets. However, representing more than three …

VennPainter: a tool for the comparison and identification of candidate genes based on Venn diagrams

G Lin, J Chai, S Yuan, C Mai, L Cai, RW Murphy… - PloS one, 2016 - journals.plos.org
VennPainter is a program for depicting unique and shared sets of genes lists and generating
Venn diagrams, by using the Qt C++ framework. The software produces Classic Venn …

Generalized Venn diagrams: a new method of visualizing complex genetic set relations

HA Kestler, A Müller, TM Gress, M Buchholz - Bioinformatics, 2005 - academic.oup.com
Motivation: Microarray experiments generate vast amounts of data. The unknown or only
partially known functional context of differentially expressed genes may be assessed by …