Chemical syntheses of inhibitory substrates of the RNA–RNA ligation reaction catalyzed by the hairpin ribozyme
AP Massey, ST Sigurdsson - Nucleic acids research, 2004 - academic.oup.com
The chemical syntheses of RNA oligomers containing modifications on the 5′‐carbon of
the 5′‐terminal nucleoside for crystallographic and mechanistic studies of the hairpin …
the 5′‐terminal nucleoside for crystallographic and mechanistic studies of the hairpin …
Chemical synthesis of an artificially branched hairpin ribozyme variant with RNA cleavage activity
SA Ivanov, EM Volkov, TS Oretskaya, S Müller - Tetrahedron, 2004 - Elsevier
Due to the development in the field of RNA synthesis over the past decade of years,
preparation of RNA oligonucleotides longer than 50 nucleotides is possible today. In this …
preparation of RNA oligonucleotides longer than 50 nucleotides is possible today. In this …
Investigation of the proposed interdomain ribose zipper in hairpin ribozyme cleavage using 2 '-modified nucleosides
DJ Earnshaw, ML Hamm, JA Piccirilli, A Karpeisky… - Biochemistry, 2000 - ACS Publications
The hairpin ribozyme achieves catalytic cleavage through interaction of essential
nucleotides located in two distinct helical domains that include internal loops. Initial docking …
nucleotides located in two distinct helical domains that include internal loops. Initial docking …
[HTML][HTML] Four ribose 2'-hydroxyl groups essential for catalytic function of the hairpin ribozyme.
BM Chowrira, A Berzal-Herranz, CF Keller… - Journal of Biological …, 1993 - Elsevier
The hairpin ribozyme catalyzes site-specific cleavage of an RNA substrate using a
magnesium-dependent transphosphorylation mechanism. Here, we describe experiments …
magnesium-dependent transphosphorylation mechanism. Here, we describe experiments …
Investigation of the recognition of an important uridine in an internal loop of a hairpin ribozyme prepared using post-synthetically modified oligonucleotides
Y Komatsu, I Kumagai, E Ohtsuka - Nucleic acids research, 1999 - academic.oup.com
Abstract We introduced 4-thio-(4SU), 2-thio-(2SU), 4-O-methyl-uridine (4MeU) and cytidine
substitutions for U+ 2, which is an important base for cleavage in a substrate RNA …
substitutions for U+ 2, which is an important base for cleavage in a substrate RNA …
Extensive phosphorothioate substitution yields highly active and nuclease-resistant hairpin ribozymes
BM Chowrira, JM Burke - Nucleic acids research, 1992 - academic.oup.com
The catalytic function of the hairpin ribozyme has been investigated by modification-
interference analysis of both ribozyme and substrate, using ribonucleoside …
interference analysis of both ribozyme and substrate, using ribonucleoside …
In Vitro Selection of Hairpin Ribozymes Activated with Short Oligonucleotides
We have carried out an in vitro selection to obtain an allosteric hairpin ribozyme, which has
cleavage activity in the presence of an exogenous short oligonucleotide as a regulator …
cleavage activity in the presence of an exogenous short oligonucleotide as a regulator …
Construction of hairpin ribozymes with a three-way junction
Y Komatsu, M Shirai, S Yamashita, E Ohtsuka - Bioorganic & Medicinal …, 1997 - Elsevier
Hairpin ribozymes with high cleavage activities were designed. An extra sequence was
introduced at the 3′-end of the hairpin ribozyme to increase the binding to the substrate …
introduced at the 3′-end of the hairpin ribozyme to increase the binding to the substrate …
Base and sugar requirements for RNA cleavage of essential nucleoside residues in internal loop B of the hairpin ribozyme: implications for secondary structure
S Schmidt, L Beigelman, A Karpeisky… - Nucleic acids …, 1996 - academic.oup.com
The hairpin ribozyme is a small self-cleaving RNA that can be engineered for RNA cleavage
in trans and has potential as a therapeutic agent. We have used a chemical synthesis …
in trans and has potential as a therapeutic agent. We have used a chemical synthesis …
The role of essential pyrimidines in the hairpin ribozyme-catalysed reaction
KJ Young, JS Vyle, TJ Pickering, MA Cohen… - Journal of molecular …, 1999 - Elsevier
The hairpin ribozyme is an example of a small catalytic RNA that catalyses the
endonucleolytic transesterification of RNA in a highly sequence-specific manner. We have …
endonucleolytic transesterification of RNA in a highly sequence-specific manner. We have …
相关搜索
- hairpin ribozyme internal loop
- hairpin ribozyme chemical syntheses
- inhibitory substrates chemical syntheses
- hairpin ribozyme inhibitory substrates
- hairpin ribozyme rna cleavage
- hairpin ribozyme nucleoside residues
- hairpin ribozymes phosphorothioate substitution
- hairpin ribozymes short oligonucleotides
- hairpin ribozyme catalytic function
- hairpin ribozyme secondary structure