Improved discovery of genetic interactions using CRISPRiSeq across multiple environments
Large-scale genetic interaction (GI) screens in yeast have been invaluable for our
understanding of molecular systems biology and for characterizing novel gene function …
understanding of molecular systems biology and for characterizing novel gene function …
[HTML][HTML] Yeast genetic interaction screens in the age of CRISPR/Cas
The ease of performing both forward and reverse genetics in Saccharomyces cerevisiae,
along with its stable haploid state and short generation times, has made this budding yeast …
along with its stable haploid state and short generation times, has made this budding yeast …
iSeq: a new double-barcode method for detecting dynamic genetic interactions in yeast
Systematic screens for genetic interactions are a cornerstone of both network and systems
biology. However, most screens have been limited to characterizing interaction networks in …
biology. However, most screens have been limited to characterizing interaction networks in …
DRYGIN: a database of quantitative genetic interaction networks in yeast
JLY Koh, H Ding, M Costanzo… - Nucleic acids …, 2010 - academic.oup.com
Genetic interactions are highly informative for deciphering the underlying functional
principles that govern how genes control cell processes. Recent developments in Synthetic …
principles that govern how genes control cell processes. Recent developments in Synthetic …
[HTML][HTML] Differential analysis of high-throughput quantitative genetic interaction data
Synthetic genetic arrays have been very effective at measuring genetic interactions in yeast
in a high-throughput manner and recently have been expanded to measure quantitative …
in a high-throughput manner and recently have been expanded to measure quantitative …
TheCellMap. org: a web-accessible database for visualizing and mining the global yeast genetic interaction network
Providing access to quantitative genomic data is key to ensure large-scale data validation
and promote new discoveries. TheCellMap. org serves as a central repository for storing and …
and promote new discoveries. TheCellMap. org serves as a central repository for storing and …
[HTML][HTML] A high-resolution gene expression atlas of epistasis between gene-specific transcription factors exposes potential mechanisms for genetic interactions
K Sameith, S Amini, MJA Groot Koerkamp… - BMC biology, 2015 - Springer
Background Genetic interactions, or non-additive effects between genes, play a crucial role
in many cellular processes and disease. Which mechanisms underlie these genetic …
in many cellular processes and disease. Which mechanisms underlie these genetic …
Environmental robustness of the global yeast genetic interaction network
INTRODUCTION Genetic interactions are identified when variants in different genes
combine to generate an unusual phenotype compared with the expected combined effect of …
combine to generate an unusual phenotype compared with the expected combined effect of …
A network of human functional gene interactions from knockout fitness screens in cancer cells
Genetic interactions mediate the emergence of phenotype from genotype. The systematic
survey of genetic interactions in yeast showed that genes operating in the same biological …
survey of genetic interactions in yeast showed that genes operating in the same biological …
Deep Mutational Scanning of Protein–Protein Interactions Between Partners Expressed from Their Endogenous Loci In Vivo
AK Dubé, R Dandage, S Dibyachintan… - … Genomics: Methods and …, 2022 - Springer
Deep mutational scanning (DMS) generates mutants of a protein of interest in a
comprehensive manner. CRISPR-Cas9 technology enables large-scale genome editing …
comprehensive manner. CRISPR-Cas9 technology enables large-scale genome editing …