Electrostatic interactions in biological DNA-related systems
AG Cherstvy - Physical Chemistry Chemical Physics, 2011 - pubs.rsc.org
In this perspective article, we focus on recent developments in the theory of charge effects in
biological DNA-related systems. The electrostatic effects on different levels of DNA …
biological DNA-related systems. The electrostatic effects on different levels of DNA …
Positively charged surfaces increase the flexibility of DNA
Many proteins" bind" DNA through positively charged amino acids on their surfaces.
However, to overcome significant energetic and topological obstacles, proteins that bend or …
However, to overcome significant energetic and topological obstacles, proteins that bend or …
Complexes of semiflexible polyelectrolytes and charged spheres as models for salt-modulated nucleosomal structures
KK Kunze, RR Netz - Physical Review E, 2002 - APS
We investigate the complexation behavior between a semiflexible charged polymer and an
oppositely charged sphere with parameters appropriate for the DNA-histone system. We …
oppositely charged sphere with parameters appropriate for the DNA-histone system. We …
[引用][C] Electrostatic correlations fold DNA
MO Khan, B Jönsson - Biopolymers: Original Research on …, 1999 - Wiley Online Library
Electrostatic interactions have important effects on the physical properties of
macromolecules. 1, 2 The DNA molecule is a case of special interest where many …
macromolecules. 1, 2 The DNA molecule is a case of special interest where many …
Microscopics of complexation between long DNA molecules and positively charged colloids
K Keren, Y Soen, GB Yoseph, R Gilad, E Braun… - Physical review …, 2002 - APS
Extensive atomic force and electron microscopy reveal a new, generic DNA-colloid complex
with a fixed number of DNA bases per colloid. The fiber shaped complex is stable in the …
with a fixed number of DNA bases per colloid. The fiber shaped complex is stable in the …
Electrostatic mechanisms of DNA deformation
LD Williams, LJ Maher III - Annual review of biophysics and …, 2000 - annualreviews.org
▪ Abstract The genomes of higher cells consist of double-helical DNA, a densely charged
polyelectrolyte of immense length. The intrinsic physical properties of DNA, as well as the …
polyelectrolyte of immense length. The intrinsic physical properties of DNA, as well as the …
DNA–DNA interactions in tight supercoils are described by a small effective charge density
C Maffeo, R Schöpflin, H Brutzer, R Stehr… - Physical review …, 2010 - APS
DNA-DNA interactions are important for genome compaction and transcription regulation. In
studies of such complex processes, DNA is often modeled as a homogeneously charged …
studies of such complex processes, DNA is often modeled as a homogeneously charged …
[HTML][HTML] Physicochemical analysis of electrostatic foundation for DNA–protein interactions in chromatin transformations
N Korolev, OV Vorontsova, L Nordenskiöld - Progress in biophysics and …, 2007 - Elsevier
Electrostatic interactions between DNA and DNA-packaging proteins, the histones,
contribute substantially to stability of eukaryotic chromatin on all levels of its organization …
contribute substantially to stability of eukaryotic chromatin on all levels of its organization …
Binding of DNA to zwitterionic lipid layers mediated by divalent cations
Divalent cations, ie, calcium, magnesium, and others, are able to enhance the ability of DNA
to interact with membranes that are composed of zwitterionic lipids such as …
to interact with membranes that are composed of zwitterionic lipids such as …
[PDF][PDF] DNA-inspired electrostatics
WM Gelbart, RF Bruinsma, PA Pincus… - Physics today, 2000 - researchgate.net
U:“physiological” conditions (a 0.1 molar solution of NaCl), a DNA molecule takes on the
form of a disordered coil with a radius of gyration of several micrometers; if any lengths of the …
form of a disordered coil with a radius of gyration of several micrometers; if any lengths of the …