[HTML][HTML] Genomic nucleosome organization reconstituted with pure proteins

N Krietenstein, M Wal, S Watanabe, B Park… - Cell, 2016 - cell.com
Chromatin remodelers regulate genes by organizing nucleosomes around promoters, but
their individual contributions are obfuscated by the complex in vivo milieu of factor …

[HTML][HTML] Genome-wide nucleosome specificity and directionality of chromatin remodelers

K Yen, V Vinayachandran, K Batta, RT Koerber… - Cell, 2012 - cell.com
How chromatin remodelers cooperate to organize nucleosomes around the start and end of
genes is not known. We determined the genome-wide binding of remodeler complexes …

[HTML][HTML] Dynamic regulation of transcription factors by nucleosome remodeling

M Li, A Hada, P Sen, L Olufemi, MA Hall, BY Smith… - Elife, 2015 - elifesciences.org
The chromatin landscape and promoter architecture are dominated by the interplay of
nucleosome and transcription factor (TF) binding to crucial DNA sequence elements …

[HTML][HTML] Dynamics of chromatin and transcription during transient depletion of the RSC chromatin remodeling complex

A Klein-Brill, D Joseph-Strauss, A Appleboim… - Cell reports, 2019 - cell.com
Nucleosome organization has a key role in transcriptional regulation, yet the precise
mechanisms establishing nucleosome locations and their effect on transcription are unclear …

[HTML][HTML] Ruler elements in chromatin remodelers set nucleosome array spacing and phasing

E Oberbeckmann, V Niebauer, S Watanabe… - Nature …, 2021 - nature.com
Arrays of regularly spaced nucleosomes dominate chromatin and are often phased by
alignment to reference sites like active promoters. How the distances between nucleosomes …

[HTML][HTML] Genome information processing by the INO80 chromatin remodeler positions nucleosomes

E Oberbeckmann, N Krietenstein, V Niebauer… - Nature …, 2021 - nature.com
The fundamental molecular determinants by which ATP-dependent chromatin remodelers
organize nucleosomes across eukaryotic genomes remain largely elusive. Here, chromatin …

Epigenome regulation by dynamic nucleosome unwrapping

S Brahma, S Henikoff - Trends in biochemical sciences, 2020 - cell.com
Gene regulation in eukaryotes requires the controlled access of sequence-specific
transcription factors (TFs) to their sites in a chromatin landscape dominated by …

[HTML][HTML] ISWI and CHD chromatin remodelers bind promoters but act in gene bodies

GE Zentner, T Tsukiyama, S Henikoff - PLoS genetics, 2013 - journals.plos.org
ATP-dependent nucleosome remodelers influence genetic processes by altering
nucleosome occupancy, positioning, and composition. In vitro, Saccharomyces cerevisiae …

[HTML][HTML] Nucleosome density shapes kilobase-scale regulation by a mammalian chromatin remodeler

NJ Abdulhay, LJ Hsieh, CP McNally… - Nature Structural & …, 2023 - nature.com
Nearly all essential nuclear processes act on DNA packaged into arrays of nucleosomes.
However, our understanding of how these processes (for example, DNA replication, RNA …

Nucleosome distribution and linker DNA: connecting nuclear function to dynamic chromatin structure

HJ Szerlong, JC Hansen - Biochemistry and Cell Biology, 2011 - cdnsciencepub.com
Genetic information in eukaryotes is managed by strategic hierarchical organization of
chromatin structure. Primary chromatin structure describes an unfolded nucleosomal array …