Towards standardizing taxonomic ranks using divergence times – a case study for reconstruction of the Agaricus taxonomic system
RL Zhao, JL Zhou, J Chen, S Margaritescu… - Fungal diversity, 2016 - Springer
The recognition of taxonomic ranks in the Linnean classification system is largely arbitrary.
Some authors have proposed the use of divergence time as a universally standardized …
Some authors have proposed the use of divergence time as a universally standardized …
The ranking of fungi: a tribute to David L. Hawksworth on his 70th birthday
KD Hyde, SSN Maharachchikumbura, S Hongsanan… - Fungal diversity, 2017 - Springer
The history of assigning ranks to fungi, as well as the relative importance of using
divergence time estimates is reviewed. The paper pays tribute to the major mycological …
divergence time estimates is reviewed. The paper pays tribute to the major mycological …
Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences
JM Moncalvo, FM Lutzoni, SA Rehner… - Systematic …, 2000 - academic.oup.com
Phylogenetic relationships of mushrooms and their relatives within the order Agaricales
were addressed by using nuclear large subunit ribosomal DNA sequences. Approximately …
were addressed by using nuclear large subunit ribosomal DNA sequences. Approximately …
A compendium of generic names of agarics and Agaricales
J Kalichman, PM Kirk, PB Matheny - Taxon, 2020 - Wiley Online Library
Agarics (gilled mushrooms) and the order Agaricales include some of the best‐known and
most charismatic fungi. However, neither group has had its constituent genera exhaustively …
most charismatic fungi. However, neither group has had its constituent genera exhaustively …
High-level classification of the Fungi and a tool for evolutionary ecological analyses
High-throughput sequencing studies generate vast amounts of taxonomic data. Evolutionary
ecological hypotheses of the recovered taxa and Species Hypotheses are difficult to test due …
ecological hypotheses of the recovered taxa and Species Hypotheses are difficult to test due …
Towards genomic criteria for delineating fungal species
C Gostinčar - Journal of Fungi, 2020 - mdpi.com
The discussion of fungal species delineation has yet to reach a consensus, despite the
advancements in technology, which helped modernise traditional approaches. In particular …
advancements in technology, which helped modernise traditional approaches. In particular …
The largest type study of Agaricales species to date: bringing identification and nomenclature of Phlegmacium (Cortinarius) into the DNA era
Cortinarius is a species-rich and morphologically challenging genus with a cosmopolitan
distribution. Many names have not been used consistently and in some instances the same …
distribution. Many names have not been used consistently and in some instances the same …
Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales)
PB Matheny - Molecular phylogenetics and evolution, 2005 - Elsevier
Approximately 3000 bp across 84 taxa have been analyzed for variable regions of RPB1,
RPB2, and nLSU-rDNA to infer phylogenetic relationships in the large ectomycorrhizal …
RPB2, and nLSU-rDNA to infer phylogenetic relationships in the large ectomycorrhizal …
Taming the beast: a revised classification of Cortinariaceae based on genomic data
Family Cortinariaceae currently includes only one genus, Cortinarius, which is the largest
Agaricales genus, with thousands of species worldwide. The species are important …
Agaricales genus, with thousands of species worldwide. The species are important …
Ranking higher taxa using divergence times: a case study in Dothideomycetes
The current classification system for the recognition of taxonomic ranks among fungi,
especially at high-ranking level, is subjective. With the development of molecular …
especially at high-ranking level, is subjective. With the development of molecular …