DeepEthogram, a machine learning pipeline for supervised behavior classification from raw pixels

JP Bohnslav, NK Wimalasena, KJ Clausing, YY Dai… - Elife, 2021 - elifesciences.org
Videos of animal behavior are used to quantify researcher-defined behaviors of interest to
study neural function, gene mutations, and pharmacological therapies. Behaviors of interest …

Analyzing animal behavior via classifying each video frame using convolutional neural networks

U Stern, R He, CH Yang - Scientific reports, 2015 - nature.com
High-throughput analysis of animal behavior requires software to analyze videos. Such
software analyzes each frame individually, detecting animals' body parts. But the image …

[HTML][HTML] DeepBehavior: A deep learning toolbox for automated analysis of animal and human behavior imaging data

A Arac, P Zhao, BH Dobkin, ST Carmichael… - Frontiers in systems …, 2019 - frontiersin.org
Detailed behavioral analysis is key to understanding the brain-behavior relationship. Here,
we present deep learning-based methods for analysis of behavior imaging data in mice and …

Big behavior: challenges and opportunities in a new era of deep behavior profiling

L von Ziegler, O Sturman, J Bohacek - Neuropsychopharmacology, 2021 - nature.com
The assessment of rodent behavior forms a cornerstone of preclinical assessment in
neuroscience research. Nonetheless, the true and almost limitless potential of behavioral …

Deep-learning-based identification, tracking, pose estimation and behaviour classification of interacting primates and mice in complex environments

M Marks, Q Jin, O Sturman, L von Ziegler… - Nature machine …, 2022 - nature.com
Quantification of behaviours of interest from video data is commonly used to study brain
function, the effects of pharmacological interventions, and genetic alterations. Existing …

ezTrack: An open-source video analysis pipeline for the investigation of animal behavior

ZT Pennington, Z Dong, Y Feng, LM Vetere… - Scientific reports, 2019 - nature.com
Tracking animal behavior by video is one of the most common tasks in the life sciences.
Although commercial software exists for executing this task, they often present enormous …

Deep learning classification of canine behavior using a single collar-mounted accelerometer: Real-world validation

RD Chambers, NC Yoder, AB Carson, C Junge… - Animals, 2021 - mdpi.com
Simple Summary Collar-mounted activity monitors using battery-powered accelerometers
can continuously and accurately analyze specific canine behaviors and activity levels …

Mammalnet: A large-scale video benchmark for mammal recognition and behavior understanding

J Chen, M Hu, DJ Coker, ML Berumen… - Proceedings of the …, 2023 - openaccess.thecvf.com
Monitoring animal behavior can facilitate conservation efforts by providing key insights into
wildlife health, population status, and ecosystem function. Automatic recognition of animals …

Deep learning-based behavioral analysis reaches human accuracy and is capable of outperforming commercial solutions

O Sturman, L von Ziegler, C Schläppi, F Akyol… - …, 2020 - nature.com
To study brain function, preclinical research heavily relies on animal monitoring and the
subsequent analyses of behavior. Commercial platforms have enabled semi high …

Unsupervised quantification of naturalistic animal behaviors for gaining insight into the brain

MH McCullough, GJ Goodhill - Current Opinion in Neurobiology, 2021 - Elsevier
Neural computation has evolved to optimize the behaviors that enable our survival. Although
much previous work in neuroscience has focused on constrained task behaviors, recent …