Multiplexed precision genome editing with trackable genomic barcodes in yeast
Our understanding of how genotype controls phenotype is limited by the scale at which we
can precisely alter the genome and assess the phenotypic consequences of each …
can precisely alter the genome and assess the phenotypic consequences of each …
[HTML][HTML] Functional genetic variants revealed by massively parallel precise genome editing
A major challenge in genetics is to identify genetic variants driving natural phenotypic
variation. However, current methods of genetic mapping have limited resolution. To address …
variation. However, current methods of genetic mapping have limited resolution. To address …
Genome-scale engineering of Saccharomyces cerevisiae with single-nucleotide precision
We developed a CRISPR–Cas9-and homology-directed-repair-assisted genome-scale
engineering method named CHAnGE that can rapidly output tens of thousands of specific …
engineering method named CHAnGE that can rapidly output tens of thousands of specific …
Genome-wide mapping of mutations at single-nucleotide resolution for protein, metabolic and genome engineering
AD Garst, MC Bassalo, G Pines, SA Lynch… - Nature …, 2017 - nature.com
Improvements in DNA synthesis and sequencing have underpinned comprehensive
assessment of gene function in bacteria and eukaryotes. Genome-wide analyses require …
assessment of gene function in bacteria and eukaryotes. Genome-wide analyses require …
[HTML][HTML] Wildtype heterogeneity contributes to clonal variability in genome edited cells
L Westermann, Y Li, B Göcmen, M Niedermoser… - Scientific reports, 2022 - nature.com
Genome editing tools such as CRISPR/Cas9 enable the rapid and precise manipulation of
genomes. CRISPR-based genome editing has greatly simplified the study of gene function …
genomes. CRISPR-based genome editing has greatly simplified the study of gene function …
Whole-organism lineage tracing by combinatorial and cumulative genome editing
INTRODUCTION The developmental path by which a fertilized egg gives rise to the cells of a
multicellular organism is termed the cell lineage. In 1983, John Sulston and colleagues …
multicellular organism is termed the cell lineage. In 1983, John Sulston and colleagues …
Single-step precision genome editing in yeast using CRISPR-Cas9
A Akhmetov, JM Laurent, J Gollihar, EC Gardner… - Bio …, 2018 - bio-protocol.org
Genome modification in budding yeast has been extremely successful largely due to its
highly efficient homology-directed DNA repair machinery. Several methods for modifying the …
highly efficient homology-directed DNA repair machinery. Several methods for modifying the …
CRISPResso2 provides accurate and rapid genome editing sequence analysis
To the Editor—The field of genome editing is advancing rapidly1, most recently exemplified
by the advent of base editors that enable changing single nucleotides in a predictable …
by the advent of base editors that enable changing single nucleotides in a predictable …
CrispRVariants charts the mutation spectrum of genome engineering experiments
CRISPR-Cas9 and related technologies enable the efficient alteration of genomic DNA at
targeted positions and are widely used in applications ranging from individual gene …
targeted positions and are widely used in applications ranging from individual gene …
Genome editing systems across yeast species
Z Yang, M Blenner - Current opinion in biotechnology, 2020 - Elsevier
Yeasts are used to produce a myriad of value-added compounds. Engineering yeasts into
cost-efficient cell factories is greatly facilitated by the availability of genome editing tools …
cost-efficient cell factories is greatly facilitated by the availability of genome editing tools …