[HTML][HTML] Cis-trans isomerization of peptoid residues in the collagen triple-helix

R Qiu, X Li, K Huang, W Bai, D Zhou, G Li… - Nature …, 2023 - nature.com
Cis-peptide bonds are rare in proteins, and building blocks less favorable to the trans-
conformer have been considered destabilizing. Although proline tolerates the cis-conformer …

Peptoid residues make diverse, hyperstable collagen triple-helices

JL Kessler, G Kang, Z Qin, H Kang… - Journal of the …, 2021 - ACS Publications
As the only ribosomally encoded N-substituted amino acid, proline promotes distinct
secondary protein structures. The high proline content in collagen, the most abundant …

Recent advances in collagen mimetic peptide structure and design

SAH Hulgan, JD Hartgerink - Biomacromolecules, 2022 - ACS Publications
Collagen mimetic peptides (CMPs) fold into a polyproline type II triple helix, allowing the
study of the structure and function (or misfunction) of the collagen family of proteins. This …

[HTML][HTML] Terminal repeats impact collagen triple-helix stability through hydrogen bonding

Y Qi, D Zhou, JL Kessler, R Qiu, SM Yu, G Li, Z Qin… - Chemical …, 2022 - pubs.rsc.org
Nearly 30% of human proteins have tandem repeating sequences. Structural understanding
of the terminal repeats is well-established for many repeat proteins with the common α-helix …

Triple‐helix‐stabilizing effects in collagen model peptides containing PPII‐helix‐preorganized diproline modules

A Maaßen, JM Gebauer… - Angewandte Chemie …, 2020 - Wiley Online Library
Collagen model peptides (CMPs) serve as tools for understanding stability and function of
the collagen triple helix and have a potential for biomedical applications. In the past …

A natural interruption displays higher global stability and local conformational flexibility than a similar Gly mutation sequence in collagen mimic peptides

X Sun, Y Chai, Q Wang, H Liu, S Wang, J Xiao - Biochemistry, 2015 - ACS Publications
Natural interruptions in the repeating (Gly-XY) n amino acid sequence pattern are found
normally in triple helix domains of all nonfibrillar collagens, while any Gly substitution in …

Importance of ring puckering versus interstrand hydrogen bonds for the conformational stability of collagen

RS Erdmann, H Wennemers - Angewandte Chemie International Edition, 2011 - infona.pl
Mismatch is fine: Proline derivatives with a ring pucker mismatching that of natural collagen
but with favorable torsional angles along the peptide chain are readily tolerated within the …

Stabilization of the triple helix in collagen mimicking peptides

V Kubyshkin - Organic & Biomolecular Chemistry, 2019 - pubs.rsc.org
Collagen mimics are peptides designed to reproduce structural features of natural collagen.
A triple helix is the first element in the hierarchy of collagen folding. It is an assembly of three …

Frame shifts affect the stability of collagen triple helices

T Fiala, EP Barros, MO Ebert… - Journal of the …, 2022 - ACS Publications
Collagen model peptides (CMPs), composed of proline–(2 S, 4 R)-hydroxyproline–glycine
(POG) repeat units, have been extensively used to study the structure and stability of triple …

Cis− trans proline isomerization effects on collagen triple-helix stability are limited

N Dai, FA Etzkorn - Journal of the American Chemical Society, 2009 - ACS Publications
We investigated the effect of restricting cis− trans proline isomerization on collagen triple-
helix stability. The Pro residues at the Xaa and Yaa positions of an (Xaa-Yaa-Gly) triplet …