Interactions in the microbiome: communities of organisms and communities of genes
A central challenge in microbial community ecology is the delineation of appropriate units of
biodiversity, which can be taxonomic, phylogenetic, or functional in nature. The term …
biodiversity, which can be taxonomic, phylogenetic, or functional in nature. The term …
Defining microbiome function
JL Klassen - Nature microbiology, 2018 - nature.com
Why does a microorganism associate with a host? What function does it perform? Such
questions are difficult to unequivocally address and remain hotly debated. This is partially …
questions are difficult to unequivocally address and remain hotly debated. This is partially …
Microbiomes in light of traits: a phylogenetic perspective
BACKGROUND Microbial communities—microbiomes—are intricately linked to human
health and critical ecosystem services. New technologies allow the rapid characterization of …
health and critical ecosystem services. New technologies allow the rapid characterization of …
[HTML][HTML] Microbiome: focus on causation and mechanism
MA Fischbach - Cell, 2018 - cell.com
There is tremendous enthusiasm for the microbiome in academia and industry. This
Perspective argues that in order to realize its potential, the field needs to focus on …
Perspective argues that in order to realize its potential, the field needs to focus on …
A developing symbiosis: enabling cross-talk between ecologists and microbiome scientists
Like all interactions, the success of cross-discipline collaborations relies on effective
communication. Ecology offers theoretical frameworks and lexicons to study microbiomes …
communication. Ecology offers theoretical frameworks and lexicons to study microbiomes …
Unraveling interactions in microbial communities-from co-cultures to microbiomes
Microorganisms do not exist in isolation in the environment. Instead, they form complex
communities among themselves as well as with their hosts. Different forms of interactions not …
communities among themselves as well as with their hosts. Different forms of interactions not …
The community-function landscape of microbial consortia
Quantitatively linking the composition and function of microbial communities is a major
aspiration of microbial ecology. Microbial community functions emerge from a complex web …
aspiration of microbial ecology. Microbial community functions emerge from a complex web …
Rules of engagement: interspecies interactions that regulate microbial communities
AEF Little, CJ Robinson, SB Peterson… - Annu. Rev …, 2008 - annualreviews.org
Microbial communities comprise an interwoven matrix of biological diversity modified by
physical and chemical variation over space and time. Although these communities are the …
physical and chemical variation over space and time. Although these communities are the …
The microbiome beyond the horizon of ecological and evolutionary theory
The ecological and evolutionary study of community formation, diversity, and stability is
rooted in general theory and reinforced by decades of system-specific empirical work …
rooted in general theory and reinforced by decades of system-specific empirical work …
Metagenomic assessment of the global diversity and distribution of bacteria and fungi
Bacteria and fungi are of uttermost importance in determining environmental and host
functioning. Despite close interactions between animals, plants, their associated …
functioning. Despite close interactions between animals, plants, their associated …