Long-term evolution and short-term adaptation of microbiota strains and sub-strains in mice

B Yilmaz, C Mooser, I Keller, H Li, J Zimmermann… - Cell host & …, 2021 - cell.com
Isobiotic mice, with an identical stable microbiota composition, potentially allow models of
host-microbial mutualism to be studied over time and between different laboratories. To …

Host genetic and environmental effects on mouse intestinal microbiota

JH Campbell, CM Foster, T Vishnivetskaya… - The ISME …, 2012 - academic.oup.com
The mammalian gut harbors complex and variable microbial communities, across both host
phylogenetic space and conspecific individuals. A synergy of host genetic and …

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors

AK Benson, SA Kelly, R Legge, F Ma… - Proceedings of the …, 2010 - National Acad Sciences
In vertebrates, including humans, individuals harbor gut microbial communities whose
species composition and relative proportions of dominant microbial groups are …

Host genetic determinants of the gut microbiota of wild mice

TA Suzuki, M Phifer‐Rixey, KL Mack… - Molecular …, 2019 - Wiley Online Library
Identifying a common set of genes that mediate host–microbial interactions across
populations and species of mammals has broad relevance for human health and animal …

[HTML][HTML] Diet dominates host genotype in shaping the murine gut microbiota

RN Carmody, GK Gerber, JM Luevano, DM Gatti… - Cell host & …, 2015 - cell.com
Mammals exhibit marked interindividual variations in their gut microbiota, but it remains
unclear if this is primarily driven by host genetics or by extrinsic factors like dietary intake. To …

Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice

AL Goodman, G Kallstrom, JJ Faith… - Proceedings of the …, 2011 - National Acad Sciences
The proportion of the human gut bacterial community that is recalcitrant to culture remains
poorly defined. In this report, we combine high-throughput anaerobic culturing techniques …

Temporal stability of the mouse gut microbiota in relation to innate and adaptive immunity

PA Dimitriu, G Boyce, A Samarakoon… - Environmental …, 2013 - Wiley Online Library
Gut microbial community properties of mammals are thought to be partly shaped by a
combination of host immunity and environmental factors, but their relative importance is not …

Baseline microbiota composition modulates antibiotic-mediated effects on the gut microbiota and host

A Lavelle, TW Hoffmann, HP Pham, P Langella… - Microbiome, 2019 - Springer
Background Normal mammalian development and homeostasis are dependent upon the gut
microbiota. Antibiotics, essential for the treatment and prophylaxis of bacterial infections, can …

Functional divergence in gastrointestinal microbiota in physically-separated genetically identical mice

GB Rogers, J Kozlowska, J Keeble, K Metcalfe… - Scientific reports, 2014 - nature.com
Despite the fundamental contribution of the gut microbiota to host physiology, the extent of
its variation in genetically-identical animals used in research is not known. We report …

Comparison of co-housing and littermate methods for microbiota standardization in mouse models

SJ Robertson, P Lemire, H Maughan, A Goethel… - Cell reports, 2019 - cell.com
The intestinal microbiota is a fundamental factor that broadly influences physiology. Thus,
studies using transgenic animals should be designed to limit the confounding effects of …