Direct approach to compute Jacobians for diffuse optical tomography using perturbation Monte Carlo-based photon “replay”
Perturbation Monte Carlo (pMC) has been previously proposed to rapidly recompute optical
measurements when small perturbations of optical properties are considered, but it was …
measurements when small perturbations of optical properties are considered, but it was …
Fast calculation of multipath diffusive reflectance in optical coherence tomography
IT Lima Jr, A Kalra, HE Hernández-Figueroa… - Biomedical optics …, 2012 - opg.optica.org
We show how to efficiently calculate the signal in optical coherence tomography (OCT)
systems due to the ballistic photons, the quasi-ballistic photons, and the photons that …
systems due to the ballistic photons, the quasi-ballistic photons, and the photons that …
Improved importance sampling for Monte Carlo simulation of time-domain optical coherence tomography
IT Lima Jr, A Kalra, SS Sherif - Biomedical optics express, 2011 - opg.optica.org
We developed an importance sampling based method that significantly speeds up the
calculation of the diffusive reflectance due to ballistic and to quasi-ballistic components of …
calculation of the diffusive reflectance due to ballistic and to quasi-ballistic components of …
Hierarchical Bayesian regularization of reconstructions for diffuse optical tomography using multiple priors
F Abdelnour, C Genovese, T Huppert - Biomedical optics express, 2010 - opg.optica.org
Diffuse optical tomography (DOT) is a non-invasive brain imaging technique that uses low-
levels of near-infrared light to measure optical absorption changes due to regional blood …
levels of near-infrared light to measure optical absorption changes due to regional blood …
Hierarchical Bayesian estimation improves depth accuracy and spatial resolution of diffuse optical tomography
T Shimokawa, T Kosaka, O Yamashita, N Hiroe… - Optics express, 2012 - opg.optica.org
High-density diffuse optical tomography (HD-DOT) is an emerging technique for visualizing
the internal state of biological tissues. The large number of overlapping measurement …
the internal state of biological tissues. The large number of overlapping measurement …
MCDataset: a public reference dataset of Monte Carlo simulated quantities for multilayered and voxelated tissues computed by massively parallel PyXOpto Python …
M Bürmen, F Pernuš, P Naglič - Journal of Biomedical Optics, 2022 - spiedigitallibrary.org
Significance: Current open-source Monte Carlo (MC) method implementations for light
propagation modeling are many times tedious to build and require third-party licensed …
propagation modeling are many times tedious to build and require third-party licensed …
Hardware acceleration of a Monte Carlo simulation for photodynamic therapy treatment planning
Monte Carlo (MC) simulations are being used extensively in the field of medical biophysics,
particularly for modeling light propagation in tissues. The high computation time for MC limits …
particularly for modeling light propagation in tissues. The high computation time for MC limits …
Monte Carlo-based data generation for efficient deep learning reconstruction of macroscopic diffuse optical tomography and topography applications
Significance: Deep learning (DL) models are being increasingly developed to map sensor
data to the image domain directly. However, DL methodologies are data-driven and require …
data to the image domain directly. However, DL methodologies are data-driven and require …
Importance sampling-based Monte Carlo simulation of time-domain optical coherence tomography with embedded objects
V Periyasamy, M Pramanik - Applied optics, 2016 - opg.optica.org
Monte Carlo simulation for light propagation in biological tissue is widely used to study light–
tissue interaction. Simulation for optical coherence tomography (OCT) studies requires …
tissue interaction. Simulation for optical coherence tomography (OCT) studies requires …
Hyperspectral wide-field time domain single-pixel diffuse optical tomography platform
We present the design and comprehensive instrumental characterization of a time domain
diffuse optical tomography (TD-DOT) platform based on wide-field illumination and wide …
diffuse optical tomography (TD-DOT) platform based on wide-field illumination and wide …