Cross-species analysis of viral nucleic acid interacting proteins identifies TAOKs as innate immune regulators

FL Pennemann, A Mussabekova, C Urban… - Nature …, 2021 - nature.com
The cell intrinsic antiviral response of multicellular organisms developed over millions of
years and critically relies on the ability to sense and eliminate viral nucleic acids. Here we …

Quantitative Proteomics Identified TTC4 as a TBK1 Interactor and a Positive Regulator of SeV‐Induced Innate Immunity

J Shang, T Xia, QQ Han, X Zhao, MM Hu, HB Shu… - …, 2018 - Wiley Online Library
Abstract TBK1, STING, and MDA5 are important players within the antiviral innate immune
response network. We mapped the interactome of endogenous TBK1, STING, and MDA5 by …

High-throughput discovery and characterization of viral transcriptional effectors in human cells

CH Ludwig, AR Thurm, DW Morgens, KJ Yang, J Tycko… - Cell Systems, 2023 - cell.com
Viruses encode transcriptional regulatory proteins critical for controlling viral and host gene
expression. Given their multifunctional nature and high sequence divergence, it is unclear …

Overlapping patterns of rapid evolution in the nucleic acid sensors cGAS and OAS1 suggest a common mechanism of pathogen antagonism and escape

DC Hancks, MK Hartley, C Hagan, NL Clark… - PLoS …, 2015 - journals.plos.org
A diverse subset of pattern recognition receptors (PRRs) detects pathogen-associated
nucleic acids to initiate crucial innate immune responses in host organisms. Reflecting their …

Virus-host interactomics: new insights and opportunities for antiviral drug discovery

B De Chassey, L Meyniel-Schicklin, J Vonderscher… - Genome medicine, 2014 - Springer
The current therapeutic arsenal against viral infections remains limited, with often poor
efficacy and incomplete coverage, and appears inadequate to face the emergence of drug …

Rules of engagement: molecular insights from host-virus arms races

MD Daugherty, HS Malik - Annual review of genetics, 2012 - annualreviews.org
Mammalian genes and genomes have been shaped by ancient and ongoing challenges
from viruses. These genetic imprints can be identified via evolutionary analyses to reveal …

Discovery of widespread host protein interactions with the pre-replicated genome of CHIKV using VIR-CLASP

B Kim, S Arcos, K Rothamel, J Jian, KL Rose… - Molecular Cell, 2020 - cell.com
The primary interactions between incoming viral RNA genomes and host proteins are crucial
to infection and immunity. Until now, the ability to study these events was lacking. We …

Intracellular sensing of viral genomes and viral evasion

HC Lee, K Chathuranga, JS Lee - Experimental & molecular medicine, 2019 - nature.com
During viral infection, virus-derived cytosolic nucleic acids are recognized by host
intracellular specific sensors. The efficacy of this recognition system is crucial for triggering …

The landscape of human proteins interacting with viruses and other pathogens

MD Dyer, TM Murali, BW Sobral - PLoS pathogens, 2008 - journals.plos.org
Infectious diseases result in millions of deaths each year. Mechanisms of infection have
been studied in detail for many pathogens. However, many questions are relatively …

Systems biology-based investigation of cellular antiviral drug targets identified by gene-trap insertional mutagenesis

F Cheng, JL Murray, J Zhao, J Sheng… - PLoS computational …, 2016 - journals.plos.org
Viruses require host cellular factors for successful replication. A comprehensive systems-
level investigation of the virus-host interactome is critical for understanding the roles of host …