ClinVar: public archive of interpretations of clinically relevant variants

MJ Landrum, JM Lee, M Benson, G Brown… - Nucleic acids …, 2016 - academic.oup.com
Abstract ClinVar (https://www. ncbi. nlm. nih. gov/clinvar/) at the National Center for
Biotechnology Information (NCBI) is a freely available archive for interpretations of clinical …

ClinVar: improving access to variant interpretations and supporting evidence

MJ Landrum, JM Lee, M Benson, GR Brown… - Nucleic acids …, 2018 - academic.oup.com
Abstract ClinVar (https://www. ncbi. nlm. nih. gov/clinvar/) is a freely available, public archive
of human genetic variants and interpretations of their significance to disease, maintained at …

[HTML][HTML] Sources of discordance among germ-line variant classifications in ClinVar

S Yang, SE Lincoln, Y Kobayashi, K Nykamp… - Genetics in …, 2017 - nature.com
Purpose ClinVar is increasingly used as a resource for both genetic variant interpretation
and clinical practice. However, controversies exist regarding the consistency of …

[HTML][HTML] InterVar: clinical interpretation of genetic variants by the 2015 ACMG-AMP guidelines

Q Li, K Wang - The American Journal of Human Genetics, 2017 - cell.com
In 2015, the American College of Medical Genetics and Genomics (ACMG) and the
Association for Molecular Pathology (AMP) published updated standards and guidelines for …

VariantValidator: Accurate validation, mapping, and formatting of sequence variation descriptions

PJ Freeman, RK Hart, LJ Gretton, AJ Brookes… - Human …, 2018 - Wiley Online Library
Abstract The Human Genome Variation Society (HGVS) variant nomenclature is widely used
to describe sequence variants in scientific publications, clinical reports, and databases …

Clinical interpretation of sequence variants

J Zhang, Y Yao, H He, J Shen - Current protocols in human …, 2020 - Wiley Online Library
Clinical interpretation of DNA sequence variants is a critical step in reporting clinical genetic
testing results. Application of next‐generation sequencing technology in molecular genetic …

[HTML][HTML] The challenge of comprehensive and consistent sequence variant interpretation between clinical laboratories

MG Pepin, ML Murray, S Bailey, D Leistritz-Kessler… - Genetics in …, 2016 - Elsevier
Purpose Genetic testing has shifted from academic laboratories with expertise in specific
genes to commercial laboratories that offer tests of a diverse array of genes. The purpose of …

Using ClinVar as a resource to support variant interpretation

SM Harrison, ER Riggs, DR Maglott… - Current protocols in …, 2016 - Wiley Online Library
ClinVar is a freely accessible, public archive of reports of the relationships among genomic
variants and phenotypes. To facilitate evaluation of the clinical significance of each variant …

A systematic approach to assessing the clinical significance of genetic variants

H Duzkale, J Shen, H McLaughlin, A Alfares… - Clinical …, 2013 - Wiley Online Library
Molecular genetic testing informs diagnosis, prognosis, and risk assessment for patients and
their family members. Recent advances in low‐cost, high‐throughput DNA sequencing and …

Updated recommendation for the benign stand‐alone ACMG/AMP criterion

R Ghosh, SM Harrison, HL Rehm, SE Plon… - Human …, 2018 - Wiley Online Library
Abstract The Clinical Genome Resource (ClinGen) Sequence Variant Interpretation Working
Group set out to refine the American College of Medical Genetics and Genomics and the …