Experimental and pKa prediction aspects of tautomerism of drug-like molecules

YC Martin - Drug Discovery Today: Technologies, 2018 - Elsevier
Molecules that can tautomerize are a challenge to scientists because one must consider the
possible tautomers in most tasks involving chemical structures: for example, searching …

Towards the comprehensive, rapid, and accurate prediction of the favorable tautomeric states of drug-like molecules in aqueous solution

JR Greenwood, D Calkins, AP Sullivan… - Journal of computer …, 2010 - Springer
Generating the appropriate protonation states of drug-like molecules in solution is important
for success in both ligand-and structure-based virtual screening. Screening collections of …

Tautomerism in computer‐aided drug design

P Pospisil, P Ballmer, L Scapozza… - Journal of Receptors and …, 2003 - Taylor & Francis
Tautomers are often disregarded in computer‐aided molecular modeling applications. Little
is known about the different tautomeric states of a molecule and they are rarely registered in …

Tautomer database: a comprehensive resource for tautomerism analyses

DK Dhaked, L Guasch, MC Nicklaus - Journal of chemical …, 2020 - ACS Publications
We report a database of tautomeric structures that contains 2819 tautomeric tuples extracted
from 171 publications. Each tautomeric entry has been annotated with experimental …

What impact does tautomerism have on drug discovery and development?

DK Dhaked, MC Nicklaus - Expert Opinion on Drug Discovery, 2024 - Taylor & Francis
Tautomers are structural isomers that interconvert from one form to another. The most
common, and best-known, type of tautomerism occurs due to proton migration. Other forms …

A theoretical study of tautomerism in the gas phase and aqueous solution: a combined use of state-of-the-art ab initio quantum mechanics and free energy …

P Cieplak, P Bash, UC Singh… - Journal of the American …, 1987 - ACS Publications
The combination of ab initio quantum mechanical calculations together with the free energy
perturbation method implemented in molecular dynamics simulations gives a good …

Overview of the perspectives devoted to tautomerism in molecular design

YC Martin - Journal of Computer-Aided Molecular Design, 2010 - Springer
Overview of the perspectives devoted to tautomerism in molecular design | Journal of
Computer-Aided Molecular Design Skip to main content SpringerLink Account Menu Find a …

Generation of Tautomers Using Micro-pKa's

MA Watson, HS Yu, AD Bochevarov - Journal of Chemical …, 2019 - ACS Publications
Solutions of organic molecules containing one or more heterocycles with conjugated bonds
may exist as a mixture of tautomers, but typically only a few of them are significantly …

Fitting quantum machine learning potentials to experimental free energy data: Predicting tautomer ratios in solution

M Wieder, J Fass, JD Chodera - Chemical science, 2021 - pubs.rsc.org
The computation of tautomer ratios of druglike molecules is enormously important in
computer-aided drug discovery, as over a quarter of all approved drugs can populate …

MolTaut: A Tool for the Rapid Generation of Favorable Tautomer in Aqueous Solution

X Pan, F Zhao, Y Zhang, X Wang, X Xiao… - Journal of Chemical …, 2023 - ACS Publications
Fast and proper treatment of the tautomeric states for drug-like molecules is critical in
computer-aided drug discovery since the major tautomer of a molecule determines its …