The use of real-time PCR methods in DNA sequence variation analysis

NJ Gibson - Clinica chimica acta, 2006 - Elsevier
BACKGROUND: Real-time (RT) PCR methods for discovering and genotyping single
nucleotide polymorphisms (SNPs) are becoming increasingly important in various fields of …

PCR-based detection methods for single-nucleotide polymorphism or mutation: real-time PCR and its substantial contribution toward technological refinement

K Matsuda - Advances in clinical chemistry, 2017 - Elsevier
Single-nucleotide polymorphisms (SNPs) and single-nucleotide mutations result from the
substitution of only a single base. The SNP or mutation can be relevant to disease …

Single nucleotide polymorphism detection by polymerase chain reaction-restriction fragment length polymorphism

M Ota, H Fukushima, JK Kulski, H Inoko - Nature protocols, 2007 - nature.com
Accurate analysis of DNA sequence variation in not only humans and animals but also other
organisms has played a significant role in expanding our knowledge about genetic variety …

Comparative analysis of human DNA variations by fluorescence-based sequencing of PCR products

PY Kwok, C Carlson, TD Yager, W Ankener… - Genomics, 1994 - Elsevier
Automated, direct cycle sequencing of purified double-stranded PCR products using Taq
polymerase and fluorescently labeled dideoxynucleotide terminators provides a robust and …

[HTML][HTML] PCR amplification introduces errors into mononucleotide and dinucleotide repeat sequences

LA Clarke, CS Rebelo, J Goncalves… - Molecular …, 2001 - ncbi.nlm.nih.gov
The polymerase chain reaction (PCR) is used universally for accurate exponential
amplification of DNA. We describe a high error rate at mononucleotide and dinucleotide …

[PDF][PDF] Improved reliability of allele-specific PCR

EN Imyanitov, KG Buslov, EN Suspitsin… - …, 2002 - Taylor & Francis
Allele-specific PCR is considered to be the most straightforward approach for the detection
of SNPs (8, 9). However, its application remains rather limited, mainly because of insufficient …

Evaluation of a new efficient procedure for single-nucleotide polymorphism genotyping: tetra-primer amplification refractory mutation system-polymerase chain …

N Okayama, K Fujimura, J Nakamura, Y Suehiro… - 2004 - degruyter.com
Tetra-primer amplification refractory mutation system-polymerase chain reaction (ARMS-
PCR) is a new efficient method for single-nucleotide polymorphism (SNP) genotyping. To …

Determination of detection and quantification limits for SNP allele frequency estimation in DNA pools using real time PCR

G Schwarz, S Bäumler, A Block… - Nucleic Acids …, 2004 - academic.oup.com
The quantification of single nucleotide polymorphism (SNP) allele frequencies in pooled
DNA samples using real time PCR is a promising approach for large‐scale diagnostics and …

Enhanced allele‐specific PCR discrimination in SNP genotyping using 3′ locked nucleic acid (LNA) primers

D Latorra, K Campbell, A Wolter, JM Hurley - Human mutation, 2003 - Wiley Online Library
The specificity and reliability of locked nucleic acid (LNA) substitution at the 3′ position of
allele‐specific PCR (AS‐PCR) primers for SNP detection was investigated in direct …

Allele-specific PCR in SNP genotyping

M Gaudet, AG Fara, I Beritognolo, M Sabatti - … : Methods and Protocols, 2009 - Springer
The increasing need for large-scale genotyping applications of single nucleotide
polymorphisms (SNPs) in model and nonmodel organisms requires the development of low …