High-throughput sequencing view on the magnitude of global fungal diversity

P Baldrian, T Větrovský, C Lepinay, P Kohout - Fungal Diversity, 2022 - Springer
High-throughput DNA sequencing has dramatically transformed several areas of biodiversity
research including mycology. Despite limitations, high-throughput sequencing is nowadays …

GlobalFungi, a global database of fungal occurrences from high-throughput-sequencing metabarcoding studies

T Větrovský, D Morais, P Kohout, C Lepinay, C Algora… - Scientific Data, 2020 - nature.com
Fungi are key players in vital ecosystem services, spanning carbon cycling, decomposition,
symbiotic associations with cultivated and wild plants and pathogenicity. The high …

Best practices in metabarcoding of fungi: from experimental design to results

L Tedersoo, M Bahram, L Zinger, RH Nilsson… - Molecular …, 2022 - Wiley Online Library
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …

Mycobiome diversity: high-throughput sequencing and identification of fungi

RH Nilsson, S Anslan, M Bahram… - Nature Reviews …, 2019 - nature.com
Fungi are major ecological players in both terrestrial and aquatic environments by cycling
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …

Fungal high‐throughput taxonomic identification tool for use with next‐generation sequencing (FHiTINGS)

KC Dannemiller, D Reeves, K Bibby… - Journal of Basic …, 2014 - Wiley Online Library
Improvements in DNA sequencing technology provide unprecedented opportunities to
explore fungal diversity, but also present challenges in data analysis due to the large …

Back to the future: natural history and the way forward in modern fungal ecology

KG Peay - Fungal Ecology, 2014 - Elsevier
The growing power and increasing availability of molecular tools for identifying fungi in
environmental samples has revolutionized the way that fungal ecologists work. As a result …

Meta‐analysis of deep‐sequenced fungal communities indicates limited taxon sharing between studies and the presence of biogeographic patterns

A Meiser, M Bálint, I Schmitt - New Phytologist, 2014 - Wiley Online Library
High‐throughput amplicon sequencing gives new insights into fungal community ecology.
Massively generated molecular data lead to the discovery of vast fungal diversity. However …

[PDF][PDF] Fungal biodiversity and conservation mycology in light of new technology, big data, and changing attitudes

LA Lofgren, JE Stajich - Current Biology, 2021 - cell.com
Fungi have successfully established themselves across seemingly every possible niche,
substrate, and biome. They are fundamental to biogeochemical cycling, interspecies …

Dimensions of biodiversity in the Earth mycobiome

KG Peay, PG Kennedy, JM Talbot - Nature Reviews Microbiology, 2016 - nature.com
Fungi represent a large proportion of the genetic diversity on Earth and fungal activity
influences the structure of plant and animal communities, as well as rates of ecosystem …

Current insights into fungal species diversity and perspective on naming the environmental DNA sequences of fungi

B Wu, M Hussain, W Zhang, M Stadler, X Liu, M Xiang - Mycology, 2019 - Taylor & Francis
The global bio-diversity of fungi has been extensively investigated and their species number
has been estimated. Notably, the development of molecular phylogeny has revealed an …