Genetic diversity and evolutionary convergence of cryptic SARS-CoV-2 lineages detected via wastewater sequencing

DA Gregory, M Trujillo, C Rushford, A Flury… - PLoS …, 2022 - journals.plos.org
Wastewater-based epidemiology (WBE) is an effective way of tracking the appearance and
spread of SARS-COV-2 lineages through communities. Beginning in early 2021, we …

[HTML][HTML] High-throughput sequencing of SARS-CoV-2 in wastewater provides insights into circulating variants

RS Fontenele, S Kraberger, J Hadfield, EM Driver… - Water Research, 2021 - Elsevier
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) likely emerged from a
zoonotic spill-over event and has led to a global pandemic. The public health response has …

[PDF][PDF] Detection of SARS-CoV-2 variants in Switzerland by genomic analysis of wastewater samples

K Jahn, D Dreifuss, I Topolsky, A Kull… - MedRxiv, 2021 - scholar.archive.org
Abstract The SARS-CoV-2 lineages B. 1.1. 7 and 501. V2, which were first detected in the
United Kingdom and South Africa, respectively, are spreading rapidly in the human …

Wastewater surveillance uncovers regional diversity and dynamics of SARS-CoV-2 variants across nine states in the USA

RS Fontenele, Y Yang, EM Driver, A Magge… - Science of the Total …, 2023 - Elsevier
Wastewater-based epidemiology (WBE) is a non-invasive and cost-effective approach for
monitoring the spread of a pathogen within a community. WBE has been adopted as one of …

Genome sequencing of sewage detects regionally prevalent SARS-CoV-2 variants

A Crits-Christoph, RS Kantor, MR Olm, ON Whitney… - MBio, 2021 - Am Soc Microbiol
Viral genome sequencing has guided our understanding of the spread and extent of genetic
diversity of SARS-CoV-2 during the COVID-19 pandemic. SARS-CoV-2 viral genomes are …

SARS-CoV-2 genomic surveillance in wastewater as a model for monitoring evolution of endemic viruses

M Yousif, S Rachida, S Taukobong, N Ndlovu… - Nature …, 2023 - nature.com
As global SARS-CoV-2 burden and testing frequency have decreased, wastewater
surveillance has emerged as a key tool to support clinical surveillance efforts. The aims of …

Community-level SARS-CoV-2 sequence diversity revealed by wastewater sampling

CL Swift, M Isanovic, KEC Velez, RS Norman - Science of the Total …, 2021 - Elsevier
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the virus responsible for
causing the COVID-19 pandemic, can be detected in untreated wastewater. Wastewater …

[HTML][HTML] Detection of SARS-CoV-2 B. 1.351 (Beta) variant through wastewater surveillance before case detection in a community, Oregon, USA

M Sutton, TS Radniecki, D Kaya, D Alegre… - Emerging Infectious …, 2022 - ncbi.nlm.nih.gov
Genomic surveillance has emerged as a critical monitoring tool during the SARS-CoV-2
pandemic. Wastewater surveillance has the potential to identify and track SARS-CoV-2 …

Regional reemergence of a SARS-CoV-2 Delta lineage amid an Omicron wave detected by wastewater sequencing

A Haver, R Theijn, ID Grift, G Raaijmakers, E Poorter… - Scientific Reports, 2023 - nature.com
The implementation and integration of wastewater-based epidemiology constitutes a
valuable addition to existing pathogen surveillance systems, such as clinical surveillance for …

[HTML][HTML] Monitoring SARS-CoV-2 circulation and diversity through community wastewater sequencing, the Netherlands and Belgium

R Izquierdo-Lara, G Elsinga, L Heijnen… - Emerging infectious …, 2021 - ncbi.nlm.nih.gov
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has rapidly become a
major global health problem, and public health surveillance is crucial to monitor and prevent …