[HTML][HTML] GKLOMLI: a link prediction model for inferring miRNA–lncRNA interactions by using Gaussian kernel-based method on network profile and linear optimization …

L Wong, L Wang, ZH You, CA Yuan, YA Huang… - BMC …, 2023 - Springer
Background The limited knowledge of miRNA–lncRNA interactions is considered as an
obstruction of revealing the regulatory mechanism. Accumulating evidence on Human …

Using network distance analysis to predict lncRNA–miRNA interactions

L Zhang, P Yang, H Feng, Q Zhao, H Liu - … sciences: computational life …, 2021 - Springer
LncRNA–miRNA interactions contribute to the regulation of therapeutic targets and
diagnostic biomarkers in multifarious human diseases. However, it remains difficult to …

[HTML][HTML] Predicting lncRNA–miRNA interactions based on interactome network and graphlet interaction

L Zhang, T Liu, H Chen, Q Zhao, H Liu - Genomics, 2021 - Elsevier
In the development and treatment of many human diseases, the regulatory roles between
lncRNAs and miRNAs are important, but much remains unknown about them; moreover …

[HTML][HTML] Novel link prediction for large-scale miRNA-lncRNA interaction network in a bipartite graph

ZA Huang, YA Huang, ZH You, Z Zhu, Y Sun - BMC medical genomics, 2018 - Springer
Background Current knowledge and data on miRNA-lncRNA interactions is still limited and
little effort has been made to predict target lncRNAs of miRNAs. Accumulating evidences …

[HTML][HTML] LncRNA-miRNA interaction prediction through sequence-derived linear neighborhood propagation method with information combination

W Zhang, G Tang, S Zhou, Y Niu - BMC genomics, 2019 - Springer
Background Researchers discover lncRNAs can act as decoys or sponges to regulate the
behavior of miRNAs. Identification of lncRNA-miRNA interactions helps to understand the …

Constructing prediction models from expression profiles for large scale lncRNA–miRNA interaction profiling

YA Huang, KCC Chan, ZH You - Bioinformatics, 2018 - academic.oup.com
Motivation The interaction of miRNA and lncRNA is known to be important for gene
regulations. However, not many computational approaches have been developed to …

LNRLMI: Linear neighbour representation for predicting lncRNA‐miRNA interactions

L Wong, YA Huang, ZH You, ZH Chen… - Journal of cellular and …, 2020 - Wiley Online Library
LncRNA and miRNA are key molecules in mechanism of competing endogenous RNAs
(ceRNA), and their interactions have been discovered with important roles in gene …

[HTML][HTML] Graph embedding ensemble methods based on the heterogeneous network for lncRNA-miRNA interaction prediction

C Zhao, Y Qiu, S Zhou, S Liu, W Zhang, Y Niu - BMC genomics, 2020 - Springer
Abstract Background Researchers discover LncRNA–miRNA regulatory paradigms
modulate gene expression patterns and drive major cellular processes. Identification of …

ncRNAInter: a novel strategy based on graph neural network to discover interactions between lncRNA and miRNA

H Zhang, Y Wang, Z Pan, X Sun, M Mou… - Briefings in …, 2022 - academic.oup.com
In recent years, many studies have illustrated the significant role that non-coding RNA
(ncRNA) plays in biological activities, in which lncRNA, miRNA and especially their …

[HTML][HTML] Predicting lncRNA-miRNA Interaction via Graph Convolution Auto-Encoder

YA Huang, ZA Huang, ZH You, Z Zhu, WZ Huang… - Frontiers in …, 2019 - frontiersin.org
The interaction of miRNA and lncRNA is known to be important for gene regulations.
However, the number of known lncRNA-miRNA interactions is still very limited and there are …