Coverage‐based rarefaction and extrapolation: standardizing samples by completeness rather than size
A Chao, L Jost - Ecology, 2012 - Wiley Online Library
We propose an integrated sampling, rarefaction, and extrapolation methodology to compare
species richness of a set of communities based on samples of equal completeness (as …
species richness of a set of communities based on samples of equal completeness (as …
Spatially constrained rarefaction: incorporating the autocorrelated structure of biological communities into sample-based rarefaction
Rarefaction is a widely applied technique for comparing the species richness of samples
that differ in area, volume or sampling effort. Despite widespread adoption of sample-based …
that differ in area, volume or sampling effort. Despite widespread adoption of sample-based …
Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness
NJ Gotelli, RK Colwell - Ecology letters, 2001 - Wiley Online Library
Species richness is a fundamental measurement of community and regional diversity, and it
underlies many ecological models and conservation strategies. In spite of its importance …
underlies many ecological models and conservation strategies. In spite of its importance …
Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies
Quantifying and assessing changes in biological diversity are central aspects of many
ecological studies, yet accurate methods of estimating biological diversity from sampling …
ecological studies, yet accurate methods of estimating biological diversity from sampling …
[PDF][PDF] Species richness: estimation and comparison
A Chao, CH Chiu - Wiley StatsRef: statistics reference online, 2016 - researchgate.net
On the basis of the sampling data from an assemblage, estimation of species richness
(observed plus undetected) is statistically difficult especially for highly-diverse assemblages …
(observed plus undetected) is statistically difficult especially for highly-diverse assemblages …
Models and estimators linking individual-based and sample-based rarefaction, extrapolation and comparison of assemblages
Aims In ecology and conservation biology, the number of species counted in a biodiversity
study is a key metric but is usually a biased underestimate of total species richness because …
study is a key metric but is usually a biased underestimate of total species richness because …
Nonparametric estimation and comparison of species richness
A Chao, CH Chiu - Els, 2016 - Wiley Online Library
Species richness (the number of species) in an assemblage is a key metric in many
research fields of ecology. Simple counts of species in samples typically underestimate the …
research fields of ecology. Simple counts of species in samples typically underestimate the …
Discovering and rediscovering the sample-based rarefaction formula in the ecological literature
Rarefaction has long represented a powerful tool for detecting species richness and its
variation across spatial scales. Some authors recently reintroduced the mathematical …
variation across spatial scales. Some authors recently reintroduced the mathematical …
Quantifying sample completeness and comparing diversities among assemblages
We develop a novel class of measures to quantify sample completeness of a biological
survey. The class of measures is parameterized by an order q≥ 0 to control for sensitivity to …
survey. The class of measures is parameterized by an order q≥ 0 to control for sensitivity to …
Estimating species richness: sensitivity to sample coverage and insensitivity to spatial patterns
The number of species in an area is critical to the development of evolutionary and
ecological theory from mass extinctions to island biogeography. Still, the factors influencing …
ecological theory from mass extinctions to island biogeography. Still, the factors influencing …