Proteomic analysis of unbounded cellular compartments: synaptic clefts

KH Loh, PS Stawski, AS Draycott, ND Udeshi… - Cell, 2016 - cell.com
Cellular compartments that cannot be biochemically isolated are challenging to
characterize. Here we demonstrate the proteomic characterization of the synaptic clefts that …

[HTML][HTML] The proteomic landscape of synaptic diversity across brain regions and cell types

M van Oostrum, TM Blok, SL Giandomenico… - Cell, 2023 - cell.com
Neurons build synaptic contacts using different protein combinations that define the
specificity, function, and plasticity potential of synapses; however, the diversity of synaptic …

Organizers of inhibitory synapses come of age

D Krueger-Burg, T Papadopoulos, N Brose - Current Opinion in …, 2017 - Elsevier
Highlights•The protein machinery at inhibitory synapses is more complex than
anticipated.•Many new synapse organizers have recently been identified.•Major progress …

Proximity labeling: spatially resolved proteomic mapping for neurobiology

S Han, J Li, AY Ting - Current Opinion in Neurobiology, 2018 - Elsevier
Highlights•Proximity labeling enables proteomic interrogation of the molecular components
of subcellular regions as well as protein interaction networks.•Proximity labeling has been …

Transcellular nanoalignment of synaptic function

T Biederer, PS Kaeser, TA Blanpied - Neuron, 2017 - cell.com
At each of the brain's vast number of synapses, the presynaptic nerve terminal, synaptic cleft,
and postsynaptic specialization form a transcellular unit to enable efficient transmission of …

Proteomics of the nervous system

H Husi, SGN Grant - Trends in neurosciences, 2001 - cell.com
The recent success of large-scale industrialized genomic sequencing opens new doors in
studies of biological systems. In the current post-genomic era we must ask how to translate …

Profiling synaptic proteins identifies regulators of insulin secretion and lifespan

QL Ch'ng, D Sieburth, JM Kaplan - PLoS genetics, 2008 - journals.plos.org
Cells are organized into distinct compartments to perform specific tasks with spatial
precision. In neurons, presynaptic specializations are biochemically complex subcellular …

Transsynaptic assemblies link domains of presynaptic and postsynaptic intracellular structures across the synaptic cleft

AA Cole, TS Reese - Journal of Neuroscience, 2023 - Soc Neuroscience
The chemical synapse is a complex machine separated into three parts: presynaptic,
postsynaptic, and cleft. Super-resolution light microscopy has revealed alignment of …

Evolutionary expansion and anatomical specialization of synapse proteome complexity

RD Emes, AJ Pocklington, CNG Anderson… - Nature …, 2008 - nature.com
Understanding the origins and evolution of synapses may provide insight into species
diversity and the organization of the brain. Using comparative proteomics and genomics, we …

Synaptosome proteomics

F Bai, FA Witzmann - Subcellular Proteomics: From Cell Deconstruction to …, 2007 - Springer
Our knowledge of the complex synaptic proteome and its relationship to physiological or
pathological conditions is rapidly expanding. This has been greatly accelerated by the …