Fish community shifts along a strong fluvial environmental gradient revealed by eDNA metabarcoding

E García‐Machado, M Laporte… - Environmental …, 2022 - Wiley Online Library
Large rivers and their estuaries are structurally complex and comprise a diversity of habitats
supporting a rich biodiversity. As a result, identifying and monitoring fish communities using …

Fine‐scale environmental heterogeneity shapes fluvial fish communities as revealed by eDNA metabarcoding

CS Berger, C Hernandez, M Laporte, G Côté… - Environmental …, 2020 - Wiley Online Library
Conservation of freshwater biodiversity requires being able to track the presence and
abundance of entire fish communities. However, studying fish community composition within …

Environmental DNA metabarcoding reveals local fish communities in a species-rich coastal sea

S Yamamoto, R Masuda, Y Sato, T Sado, H Araki… - Scientific reports, 2017 - nature.com
Environmental DNA (eDNA) metabarcoding has emerged as a potentially powerful tool to
assess aquatic community structures. However, the method has hitherto lacked field tests …

[HTML][HTML] Cage transplant experiment shows weak transport effect on relative abundance of fish community composition as revealed by eDNA metabarcoding

M Laporte, CS Berger, E García-Machado, G Côté… - Ecological …, 2022 - Elsevier
Protection of freshwater fish diversity is a global conservation priority in face of its alarming
decline in the last decades. A crucial step to protect freshwater fish diversity is the production …

Harnessing eDNA metabarcoding to investigate fish community composition and its seasonal changes in the Oslo fjord

CO Carvalho, W Gromstad, M Dunthorn, HE Karlsen… - Scientific Reports, 2024 - nature.com
In the face of global ecosystem changes driven by anthropogenic activities, effective
biomonitoring strategies are crucial for mitigating impacts on vulnerable aquatic habitats …

Biodiversity assessment across a dynamic riverine system: A comparison of eDNA metabarcoding versus traditional fish surveying methods

J Hallam, EL Clare, JI Jones, JJ Day - Environmental DNA, 2021 - Wiley Online Library
While many studies have considered the ability of eDNA to assess animal communities in
lacustrine settings, fewer have considered riverine systems, particularly those spanning the …

Environmental DNA metabarcoding as a tool for biodiversity assessment and monitoring: Reconstructing established fish communities of north‐temperate lakes and …

PT Euclide, Y Lor, MJ Spear, T Tajjioui… - Diversity and …, 2021 - Wiley Online Library
Aim To evaluate the ability of precipitation‐based environmental DNA (eDNA) sample
collection and mitochondrial 12S metabarcoding sequencing to reconstruct well‐studied fish …

Proper environmental DNA metabarcoding data transformation reveals temporal stability of fish communities in a dendritic river system

M Laporte, E Reny‐Nolin, V Chouinard… - Environmental …, 2021 - Wiley Online Library
Protecting freshwater biodiversity is considered an ultimate challenge but depends on
reliable surveys of species distribution and abundance which eDNA metabarcoding …

Application of environmental DNA metabarcoding to spatiotemporal finfish community assessment in a temperate embayment

Y Liu, GH Wikfors, JM Rose, RS McBride… - Frontiers in Marine …, 2019 - frontiersin.org
Environmental DNA (eDNA) metabarcoding was used to characterize finfish communities in
the nearshore estuarine environment. Monthly sampling was conducted June–August 2017 …

[HTML][HTML] Comparison of environmental DNA metabarcoding and bottom trawling for detecting seasonal fish communities and habitat preference in a highly disturbed …

P Jiang, S Zhang, S Xu, P Xiong, Y Cao, Z Chen… - Ecological Indicators, 2023 - Elsevier
Environmental DNA (eDNA) metabarcoding has been used to study fish diversity in various
aquatic ecosystems. However, studies on fish community structure in estuarine ecosystems …