The detection of periodic reemergence events of SARS-CoV-2 Delta strain in communities dominated by Omicron
CE Westcott, KJ Sokoloski, EC Rouchka, JH Chariker… - Pathogens, 2022 - mdpi.com
Despite entering an endemic phase, SARS-CoV-2 remains a significant burden to public
health across the global community. Wastewater sampling has consistently proven utility to …
health across the global community. Wastewater sampling has consistently proven utility to …
[HTML][HTML] Tracking emergence and spread of SARS-CoV-2 Omicron variant in large and small communities by wastewater monitoring in Alberta, Canada
CRJ Hubert, N Acosta, BJM Waddell… - Emerging Infectious …, 2022 - ncbi.nlm.nih.gov
Wastewater monitoring of SARS-CoV-2 enables early detection and monitoring of the
COVID-19 disease burden in communities and can track specific variants of concern. We …
COVID-19 disease burden in communities and can track specific variants of concern. We …
[HTML][HTML] Rapid displacement of SARS-CoV-2 variant Delta by Omicron revealed by allele-specific PCR in wastewater
Abstract On November 26, 2021, the B. 1.1. 529 COVID-19 variant was classified as the
Omicron variant of concern (VOC). Reports of higher transmissibility and potential immune …
Omicron variant of concern (VOC). Reports of higher transmissibility and potential immune …
[HTML][HTML] High-throughput sequencing of SARS-CoV-2 in wastewater provides insights into circulating variants
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) likely emerged from a
zoonotic spill-over event and has led to a global pandemic. The public health response has …
zoonotic spill-over event and has led to a global pandemic. The public health response has …
Baseline sequencing surveillance of public clinical testing, hospitals, and community wastewater reveals rapid emergence of SARS-CoV-2 omicron variant of concern …
MF Smith, SC Holland, MB Lee, JC Hu, NC Pham… - Mbio, 2023 - Am Soc Microbiol
The adaptive evolution of SARS-CoV-2 variants is driven by selection for increased viral
fitness in transmissibility and immune evasion. Understanding the dynamics of how an …
fitness in transmissibility and immune evasion. Understanding the dynamics of how an …
[HTML][HTML] Identification of a rare SARS-CoV-2 XL hybrid variant in wastewater and the subsequent discovery of two infected individuals in Nevada
The identification of novel SARS-CoV-2 variants can predict new patterns of COVID-19
community transmission and lead to the deployment of public health resources. However …
community transmission and lead to the deployment of public health resources. However …
Genetic diversity and evolutionary convergence of cryptic SARS-CoV-2 lineages detected via wastewater sequencing
DA Gregory, M Trujillo, C Rushford, A Flury… - PLoS …, 2022 - journals.plos.org
Wastewater-based epidemiology (WBE) is an effective way of tracking the appearance and
spread of SARS-COV-2 lineages through communities. Beginning in early 2021, we …
spread of SARS-COV-2 lineages through communities. Beginning in early 2021, we …
Regional reemergence of a SARS-CoV-2 Delta lineage amid an Omicron wave detected by wastewater sequencing
A Haver, R Theijn, ID Grift, G Raaijmakers, E Poorter… - Scientific Reports, 2023 - nature.com
The implementation and integration of wastewater-based epidemiology constitutes a
valuable addition to existing pathogen surveillance systems, such as clinical surveillance for …
valuable addition to existing pathogen surveillance systems, such as clinical surveillance for …
[HTML][HTML] Estimating relative abundance of 2 SARS-CoV-2 variants through wastewater surveillance at 2 large metropolitan sites, United States
TY Alexander, B Hughes, MK Wolfe… - Emerging Infectious …, 2022 - ncbi.nlm.nih.gov
Monitoring severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of
concern (VOCs) is critical for public health management of coronavirus disease. Sequencing …
concern (VOCs) is critical for public health management of coronavirus disease. Sequencing …
Genome sequencing of sewage detects regionally prevalent SARS-CoV-2 variants
Viral genome sequencing has guided our understanding of the spread and extent of genetic
diversity of SARS-CoV-2 during the COVID-19 pandemic. SARS-CoV-2 viral genomes are …
diversity of SARS-CoV-2 during the COVID-19 pandemic. SARS-CoV-2 viral genomes are …
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