Structure and function of rice hybrid genomes reveal genetic basis and optimal performance of heterosis

Z Gu, J Gong, Z Zhu, Z Li, Q Feng, C Wang, Y Zhao… - Nature Genetics, 2023 - nature.com
Exploitation of crop heterosis is crucial for increasing global agriculture production.
However, the quantitative genomic analysis of heterosis was lacking, and there is currently …

Genomic architecture of heterosis for yield traits in rice

X Huang, S Yang, J Gong, Q Zhao, Q Feng, Q Zhan… - Nature, 2016 - nature.com
Increasing grain yield is a long-term goal in crop breeding to meet the demand for global
food security. Heterosis, when a hybrid shows higher performance for a trait than both …

Large-scale genomic and transcriptomic profiles of rice hybrids reveal a core mechanism underlying heterosis

J Xie, W Wang, T Yang, Q Zhang, Z Zhang, X Zhu, N Li… - Genome Biology, 2022 - Springer
Background Heterosis is widely used in agriculture. However, its molecular mechanisms are
still unclear in plants. Here, we develop, sequence, and record the phenotypes of 418 …

Genomic analysis of hybrid rice varieties reveals numerous superior alleles that contribute to heterosis

X Huang, S Yang, J Gong, Y Zhao, Q Feng… - Nature …, 2015 - nature.com
Exploitation of heterosis is one of the most important applications of genetics in agriculture.
However, the genetic mechanisms of heterosis are only partly understood, and a global view …

Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice

Q Zhao, Q Feng, H Lu, Y Li, A Wang, Q Tian, Q Zhan… - Nature …, 2018 - nature.com
The rich genetic diversity in Oryza sativa and Oryza rufipogon serves as the main sources in
rice breeding. Large-scale resequencing has been undertaken to discover allelic variants in …

Divergent selection and genetic introgression shape the genome landscape of heterosis in hybrid rice

Z Lin, P Qin, X Zhang, C Fu, H Deng… - Proceedings of the …, 2020 - National Acad Sciences
The successful application of heterosis in hybrid rice has dramatically improved rice
productivity, but the genetic mechanism for heterosis in the hybrid rice remains unclear. In …

Patterns of genome-wide allele-specific expression in hybrid rice and the implications on the genetic basis of heterosis

L Shao, F Xing, C Xu, Q Zhang, J Che… - Proceedings of the …, 2019 - National Acad Sciences
Utilization of heterosis has greatly increased the productivity of many crops worldwide.
Although tremendous progress has been made in characterizing the genetic basis of …

An asymmetric allelic interaction drives allele transmission bias in interspecific rice hybrids

Y Xie, J Tang, X Xie, X Li, J Huang, Y Fei, J Han… - Nature …, 2019 - nature.com
Hybrid sterility (HS) between Oryza sativa (Asian rice) and O. glaberrima (African rice) is
mainly controlled by the S1 locus. However, our limited understanding of the HS mechanism …

Genomic variation in 3,010 diverse accessions of Asian cultivated rice

W Wang, R Mauleon, Z Hu, D Chebotarov, S Tai, Z Wu… - Nature, 2018 - nature.com
Here we analyse genetic variation, population structure and diversity among 3,010 diverse
Asian cultivated rice (Oryza sativa L.) genomes from the 3,000 Rice Genomes Project. Our …

The map-based sequence of the rice genome

International Rice Genome Sequencing Project… - Nature, 2005 - nature.com
Rice, one of the world's most important food plants, has important syntenic relationships with
the other cereal species and is a model plant for the grasses. Here we present a map-based …