[HTML][HTML] High-content CRISPR screening
CRISPR screens are a powerful source of biological discovery, enabling the unbiased
interrogation of gene function in a wide range of applications and species. In pooled …
interrogation of gene function in a wide range of applications and species. In pooled …
[HTML][HTML] Pooled Genome-Scale CRISPR Screens in Single Cells
D Schraivogel, LM Steinmetz… - Annual Review of …, 2023 - annualreviews.org
Assigning functions to genes and learning how to control their expression are part of the
foundation of cell biology and therapeutic development. An efficient and unbiased method to …
foundation of cell biology and therapeutic development. An efficient and unbiased method to …
Design and analysis of CRISPR–Cas experiments
A large and ever-expanding set of CRISPR–Cas systems now enables the rapid and flexible
manipulation of genomes in both targeted and large-scale experiments. Numerous software …
manipulation of genomes in both targeted and large-scale experiments. Numerous software …
Pooled CRISPR screening with single-cell transcriptome readout
CRISPR-based genetic screens are accelerating biological discovery, but current methods
have inherent limitations. Widely used pooled screens are restricted to simple readouts …
have inherent limitations. Widely used pooled screens are restricted to simple readouts …
CRISPR knockout screening outperforms shRNA and CRISPRi in identifying essential genes
B Evers, K Jastrzebski, JPM Heijmans… - Nature …, 2016 - nature.com
High-throughput genetic screens have become essential tools for studying a wide variety of
biological processes. Here we experimentally compare systems based on clustered …
biological processes. Here we experimentally compare systems based on clustered …
CRISPRi and CRISPRa screens in mammalian cells for precision biology and medicine
M Kampmann - ACS chemical biology, 2018 - ACS Publications
Next-generation DNA sequencing technologies have led to a massive accumulation of
genomic and transcriptomic data from patients and healthy individuals. The major challenge …
genomic and transcriptomic data from patients and healthy individuals. The major challenge …
Am I ready for CRISPR? A user's guide to genetic screens
JG Doench - Nature Reviews Genetics, 2018 - nature.com
Exciting new technologies are often self-limiting in their rollout, as access to state-of-the-art
instrumentation or the need for years of hands-on experience, for better or worse, ensures …
instrumentation or the need for years of hands-on experience, for better or worse, ensures …
Genome-scale CRISPR pooled screens
NE Sanjana - Analytical biochemistry, 2017 - Elsevier
Genome editing technologies such as clustered regularly interspaced short palindromic
repeats (CRISPR) systems have ushered in a new era of targeted DNA manipulation. The …
repeats (CRISPR) systems have ushered in a new era of targeted DNA manipulation. The …
[HTML][HTML] Optimized libraries for CRISPR-Cas9 genetic screens with multiple modalities
The creation of genome-wide libraries for CRISPR knockout (CRISPRko), interference
(CRISPRi), and activation (CRISPRa) has enabled the systematic interrogation of gene …
(CRISPRi), and activation (CRISPRa) has enabled the systematic interrogation of gene …
Combinatorial single-cell CRISPR screens by direct guide RNA capture and targeted sequencing
Single-cell CRISPR screens enable the exploration of mammalian gene function and
genetic regulatory networks. However, use of this technology has been limited by reliance …
genetic regulatory networks. However, use of this technology has been limited by reliance …