Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users
Abstract The SIB Swiss Institute of Bioinformatics (https://www. sib. swiss) creates, maintains
and disseminates a portfolio of reliable and state-of-the-art bioinformatics services and …
and disseminates a portfolio of reliable and state-of-the-art bioinformatics services and …
ExPASy: SIB bioinformatics resource portal
P Artimo, M Jonnalagedda, K Arnold… - Nucleic acids …, 2012 - academic.oup.com
Abstract ExPASy (http://www. expasy. org) has worldwide reputation as one of the main
bioinformatics resources for proteomics. It has now evolved, becoming an extensible and …
bioinformatics resources for proteomics. It has now evolved, becoming an extensible and …
EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats
Motivation: Advancing the search, publication and integration of bioinformatics tools and
resources demands consistent machine-understandable descriptions. A comprehensive …
resources demands consistent machine-understandable descriptions. A comprehensive …
Web services at the european bioinformatics institute-2009
H Mcwilliam, F Valentin, M Goujon, W Li… - Nucleic acids …, 2009 - academic.oup.com
Abstract The European Bioinformatics Institute (EMBL-EBI) has been providing access to
mainstream databases and tools in bioinformatics since 1997. In addition to the traditional …
mainstream databases and tools in bioinformatics since 1997. In addition to the traditional …
Mobyle: a new full web bioinformatics framework
Motivation: For the biologist, running bioinformatics analyses involves a time-consuming
management of data and tools. Users need support to organize their work, retrieve …
management of data and tools. Users need support to organize their work, retrieve …
The European Bioinformatics Institute's data resources: towards systems biology
C Brooksbank, G Cameron, J Thornton - Nucleic acids research, 2005 - academic.oup.com
Genomic and post-genomic biological research has provided fine-grain insights into the
molecular processes of life, but also threatens to drown biomedical researchers in data …
molecular processes of life, but also threatens to drown biomedical researchers in data …
The gene ontology annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro
E Camon, M Magrane, D Barrell, D Binns… - Genome …, 2003 - genome.cshlp.org
Gene Ontology Annotation (GOA) is a project run by the European Bioinformatics Institute
(EBI) that aims to provide assignments of terms from the Gene Ontology (GO) resource to …
(EBI) that aims to provide assignments of terms from the Gene Ontology (GO) resource to …
Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data
M Akhmedov, A Martinelli, R Geiger… - NAR genomics and …, 2020 - academic.oup.com
As the cost of sequencing drops rapidly, the amount of 'omics data increases exponentially,
making data visualization and interpretation—'tertiary 'analysis a bottleneck. Specialized …
making data visualization and interpretation—'tertiary 'analysis a bottleneck. Specialized …
Tools and data services registry: a community effort to document bioinformatics resources
Life sciences are yielding huge data sets that underpin scientific discoveries fundamental to
improvement in human health, agriculture and the environment. In support of these …
improvement in human health, agriculture and the environment. In support of these …
[HTML][HTML] openBIS: a flexible framework for managing and analyzing complex data in biology research
A Bauch, I Adamczyk, P Buczek, FJ Elmer… - BMC …, 2011 - Springer
Background Modern data generation techniques used in distributed systems biology
research projects often create datasets of enormous size and diversity. We argue that in …
research projects often create datasets of enormous size and diversity. We argue that in …